DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6739 and lrp5

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_009296098.1 Gene:lrp5 / 568518 ZFINID:ZDB-GENE-050518-2 Length:1615 Species:Danio rerio


Alignment Length:956 Identity:172/956 - (17%)
Similarity:283/956 - (29%) Gaps:373/956 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LEAIANETSSVTGLRRQ--PTKYPHGLNIT------------VQTID--DDNEGSPKD------- 48
            |:....|::::.||:|:  ....||...:|            :::|:  |...|..:.       
Zfish   828 LDTCMIESTNMQGLQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLE 892

  Fly    49 --------HSDYTRASGDSCWSKTQKYHIGMLGSPETLAELQVRRYKYPLTANYYLNSKLERPEK 105
                    ||.....:.|...:..|..|: .|.||   :..|.|     ..::|.|.:.......
Zfish   893 YVMDILVFHSSRQDGANDCSQNNGQCAHL-CLASP---SGAQCR-----CASHYTLEANGRNCSS 948

  Fly   106 PTPWMLLGYARSVCR----------------WKYLRWPIIFVASVLLFFGLITYCLWLHDVSVAR 154
            |:.::|.....|:.|                .|.||        .:.|..|.....|:.    .|
Zfish   949 PSSFLLFSQKSSISRMVLGEQSPDMILPIHVMKNLR--------AISFDPLERLVYWVD----GR 1001

  Fly   155 AKFLQRRYEATLTSTSSSSNE------------------VWDEETTSSTERSPQETTRLEDMDDS 201
            ....:.|.:.|..||..:.|.                  .|..|||:        |..:..||  
Zfish  1002 QNIRRSRDDGTQASTVMTPNSDHPKQPHDLSLDPYSRTVYWTCETTN--------TINIHRMD-- 1056

  Fly   202 DESTELPEIAFGDDGDPEA---GGEDG-------------------DGDYDDTL----------- 233
              ...:.|:...|...|.|   ..|.|                   ||...::|           
Zfish  1057 --GHIIGEVLKDDVDKPRAIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTSLIRPVAL 1119

  Fly   234 -----------LPADSIRFTSGH---------QNS-----FGVP--------IEQDKRMLQLLKE 265
                       :.||..|..|..         |:|     .|:.        |::.::|::.:.:
Zfish  1120 ALDNKLGKLFWVDADLKRIESSDLSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIERVDK 1184

  Fly   266 LLHKPQATPAGNEPTLTRVSPTLPPPLSASGRPTEAMALTTPSTTNSGCQSTMLPMCQGVLDYDL 330
            |..:.:....|....||.:.       :.....|:..|....|..|.||....:....|      
Zfish  1185 LTGEKRTRIQGRLQYLTGIH-------AVQYMETDEFATHPCSRDNGGCSHICIAKGDG------ 1236

  Fly   331 TFNREGAAPRDAVSM--AAYDSLIRA----NCSVRAAEFICGALEPECRPLHIGQLPPCRRICKA 389
                   .||.:..|  ....:|:..    .||  :.:|.|...|.:|       :|...| |..
Zfish  1237 -------TPRCSCPMHLVLLQNLLSCGEPPTCS--SEQFTCATGEIDC-------IPMAWR-CDG 1284

  Fly   390 ILEACSIPIYNSDVLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKI 454
            |.|...    |||.:    :|.:                   |...:|||..|.|:....:|:..
Zfish  1285 IAECAD----NSDEM----NCPI-------------------CSKLQFQCDKGQCVDIQVRCNGE 1322

  Fly   455 KDCQGGEDEDEQCLVCEPDEFRCRSNEKCLVEKYRCDQNIDCMDGSDEQDCD------------- 506
            .||..|.||.:...:|..::||| .|.:|:::|.:||...||.|.|||:.||             
Zfish  1323 PDCADGSDEQDCETICLSNQFRC-GNSQCILKKQQCDSFPDCTDESDERFCDFPPPPNDLPRHTS 1386

  Fly   507 ---------------------------------------EYGSGD-------LAPFDESE---LN 522
                                                   ||.||.       :||.:...   ::
Zfish  1387 TIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIAPTNSQHGKGIS 1451

  Fly   523 AFPRVFTYASFLSPNETNDKVY--TYIT-ATTDEDAGTETKFQIHQVAAPAPPVNSSAEEGAGGP 584
            ....:.:..|.:..:.:...:|  .::| |::...:.|:..|....:..|..|....:...|   
Zfish  1452 CGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQMLNPPPSPATDRSLYNA--- 1513

  Fly   585 KGFVNFRDSKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRERTTS 649
                      |:..:|:|.:    :.|:.|..:...|:.||||.                  :|.
Zfish  1514 ----------EVFYSSNSPS----TTRSYRPYLMRGVAPPTTPC------------------STD 1546

  Fly   650 TTTTSTTTSTTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITVSQ 714
            ...:..|||...|         :...:.:|   |:.:||.        ||...|         ||
Zfish  1547 VCDSDYTTSRWKS---------NKYYMDLN---SDSDPYP--------PPPTPR---------SQ 1582

  Fly   715 LCDKQIDCPDAADELMCVYRERPSRRRLTSTTAPPTTSSAPPETST 760
            ....:..||.:           ||..|......||     ||...|
Zfish  1583 YMSAEESCPPS-----------PSTERSYFHLCPP-----PPSPCT 1612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 21/118 (18%)
LDLa 432..464 CDD:238060 11/31 (35%)
LDLa 470..505 CDD:238060 15/34 (44%)
LDLa 697..731 CDD:238060 7/33 (21%)
lrp5XP_009296098.1 LY 105..147 CDD:214531
Ldl_recept_b 168..208 CDD:278487
LY 192..234 CDD:214531
LY 235..269 CDD:214531
FXa_inhibition 304..341 CDD:291342
Ldl_recept_b 390..429 CDD:278487
LY 413..455 CDD:214531
LY 456..499 CDD:214531
LY 501..542 CDD:214531
LY 544..583 CDD:214531
FXa_inhibition 610..645 CDD:291342
LY 674..714 CDD:214531
LY 717..757 CDD:214531
LY 758..800 CDD:214531
LY 802..843 CDD:214531 4/14 (29%)
LY 845..884 CDD:214531 6/38 (16%)
FXa_inhibition 911..946 CDD:291342 9/43 (21%)
LY 974..1013 CDD:214531 8/50 (16%)
LY 1106..1148 CDD:214531 5/41 (12%)
FXa_inhibition 1219..1255 CDD:291342 9/48 (19%)
LDLa 1261..1297 CDD:238060 14/53 (26%)
LDLa 1300..1334 CDD:238060 12/33 (36%)
LDLa 1338..1372 CDD:238060 15/34 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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