DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and lrp10

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_688859.4 Gene:lrp10 / 560361 ZFINID:ZDB-GENE-140418-2 Length:748 Species:Danio rerio


Alignment Length:689 Identity:143/689 - (20%)
Similarity:219/689 - (31%) Gaps:249/689 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 GEDGDGDY------DDTL--LPADSIRFTSGHQNSFGVPIEQDKRMLQLLK-----------ELL 267
            |.|.||.|      |::|  ||                |.|.....:.||.           .||
Zfish   175 GSDEDGCYSPEPPIDNSLNDLP----------------PFETTTSTISLLSTDAPPPKIPDFPLL 223

  Fly   268 HKPQATPAGNEPTLTRVSPTLPPPLSASGRPTEAMALTTPSTT----------NSGCQS----TM 318
              ||..|.|........|.|.|.|   :|:..|.:....|..:          :.|.:.    |.
Zfish   224 --PQGGPCGGYLKAFYGSFTPPVP---TGQKMECVWTVDPQDSRPLKLELQQLDLGVKDLITITD 283

  Fly   319 LPMCQGVLDYDLTFNREGAAPRDAVSMAAYDSLIRA-------------NCSVRAAEFICGALEP 370
            .|...|.:...:||    .:...||.:.:...|:..             |.:.|..::..     
Zfish   284 QPYGMGNIIKTITF----VSNNKAVEVESRTGLLSLIYRREPVLEGRGFNATYRITDYCL----- 339

  Fly   371 ECRPLHIGQLPPCRRICKAILEACSIPIYNSDVLGELFDCNLYPDAHESHKCEDPTRRRDYCYG- 434
                       |...:|...|..|    |.:|.     .|    |.|  ..|.:.....:.|:| 
Zfish   340 -----------PWEELCGGSLGGC----YTADQ-----RC----DGH--WDCPETGLDEEACWGC 378

  Fly   435 --NEFQCHDGS------------CIPQNWQCDKIKDCQGGEDEDEQCLVCEPDEFRCRSNEKCLV 485
              ..|.|..|.            |...:.:|:...:|..|.||.| |.:|:|..|.|.| ::|:.
Zfish   379 KAGSFLCAMGGIKKAGHQTENPVCYSFHERCNYQLNCPDGTDERE-CTICQPGTFHCDS-DRCVF 441

  Fly   486 EKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPR-VFTYASF---------------- 533
            |.:|||..:||.||:||.:|..               ..|| |.|.|:.                
Zfish   442 ESWRCDGQVDCKDGTDELNCTA---------------TLPRKVITAATVGSLVCGLLLVIAMGCT 491

  Fly   534 --LSPNETNDKVYTYITATTDEDAGTETKFQIHQVAAPA----------PPVNSSAEEGAGGPKG 586
              |....|.:  |:.....|.::|..     |.|.|.|:          |||.....|   .|..
Zfish   492 CKLYSLRTRE--YSLFAPITRQEAEL-----IQQQAPPSYGQLIAQGIIPPVEDFPTE---NPNE 546

  Fly   587 FV--NFRDSKEIMMTSDSET-----KFKYSQRANRTSVKF-----SVSAPTTPAARTSSAIPSSA 639
            .|  :.|...:::...::.:     :.::.:||.|...::     :.|.||...|.:|       
Zfish   547 TVSLSLRGILQLLRQDNASSLRRRRRPRFVRRAVRRLRRWGLIPRATSRPTQTTASSS------- 604

  Fly   640 LVQQRERTTSTT--------TTSTTTSTTTSSITSTPSITSTT-------LIPINAATSEPNPYE 689
              ||.|...|:|        .:|..|...:.|:|....::..|       ..|.:.:...|.|::
Zfish   605 --QQTEAANSSTQPSQSSPGASSVATEAFSQSLTQKLGLSQQTETQQQAEAPPPSPSPPPPFPFQ 667

  Fly   690 VVTSLGG--CPPQELRCVSGKCITVSQLCDKQIDCPDAADELMCVY--------RERPSRRRLTS 744
            .|.|...  .||                    |..|.::..|..::        |.|||    .|
Zfish   668 PVESAEAQQTPP--------------------ITAPPSSPSLASLFHTLGRSISRFRPS----PS 708

  Fly   745 TTAPPTTSSAPPETSTATTTTG----PLSSTRRSLRTTP 779
            ||:.|.  ||.|..|::::...    |||....|....|
Zfish   709 TTSLPL--SASPSFSSSSSEDEVLLIPLSDDTTSEDDVP 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 20/129 (16%)
LDLa 432..464 CDD:238060 10/46 (22%)
LDLa 470..505 CDD:238060 16/34 (47%)
LDLa 697..731 CDD:238060 5/33 (15%)
lrp10XP_688859.4 CUB 36..136 CDD:238001
LDLa 142..181 CDD:238060 3/5 (60%)
CUB 229..334 CDD:294042 18/111 (16%)
LDLa 427..461 CDD:238060 16/34 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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