DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and lrp10

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_688859.4 Gene:lrp10 / 560361 ZFINID:ZDB-GENE-140418-2 Length:748 Species:Danio rerio


Alignment Length:689 Identity:143/689 - (20%)
Similarity:219/689 - (31%) Gaps:249/689 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 GEDGDGDY------DDTL--LPADSIRFTSGHQNSFGVPIEQDKRMLQLLK-----------ELL 267
            |.|.||.|      |::|  ||                |.|.....:.||.           .||
Zfish   175 GSDEDGCYSPEPPIDNSLNDLP----------------PFETTTSTISLLSTDAPPPKIPDFPLL 223

  Fly   268 HKPQATPAGNEPTLTRVSPTLPPPLSASGRPTEAMALTTPSTT----------NSGCQS----TM 318
              ||..|.|........|.|.|.|   :|:..|.:....|..:          :.|.:.    |.
Zfish   224 --PQGGPCGGYLKAFYGSFTPPVP---TGQKMECVWTVDPQDSRPLKLELQQLDLGVKDLITITD 283

  Fly   319 LPMCQGVLDYDLTFNREGAAPRDAVSMAAYDSLIRA-------------NCSVRAAEFICGALEP 370
            .|...|.:...:||    .:...||.:.:...|:..             |.:.|..::..     
Zfish   284 QPYGMGNIIKTITF----VSNNKAVEVESRTGLLSLIYRREPVLEGRGFNATYRITDYCL----- 339

  Fly   371 ECRPLHIGQLPPCRRICKAILEACSIPIYNSDVLGELFDCNLYPDAHESHKCEDPTRRRDYCYG- 434
                       |...:|...|..|    |.:|.     .|    |.|  ..|.:.....:.|:| 
Zfish   340 -----------PWEELCGGSLGGC----YTADQ-----RC----DGH--WDCPETGLDEEACWGC 378

  Fly   435 --NEFQCHDGS------------CIPQNWQCDKIKDCQGGEDEDEQCLVCEPDEFRCRSNEKCLV 485
              ..|.|..|.            |...:.:|:...:|..|.||.| |.:|:|..|.|.| ::|:.
Zfish   379 KAGSFLCAMGGIKKAGHQTENPVCYSFHERCNYQLNCPDGTDERE-CTICQPGTFHCDS-DRCVF 441

  Fly   486 EKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPR-VFTYASF---------------- 533
            |.:|||..:||.||:||.:|..               ..|| |.|.|:.                
Zfish   442 ESWRCDGQVDCKDGTDELNCTA---------------TLPRKVITAATVGSLVCGLLLVIAMGCT 491

  Fly   534 --LSPNETNDKVYTYITATTDEDAGTETKFQIHQVAAPA----------PPVNSSAEEGAGGPKG 586
              |....|.:  |:.....|.::|..     |.|.|.|:          |||.....|   .|..
Zfish   492 CKLYSLRTRE--YSLFAPITRQEAEL-----IQQQAPPSYGQLIAQGIIPPVEDFPTE---NPNE 546

  Fly   587 FV--NFRDSKEIMMTSDSET-----KFKYSQRANRTSVKF-----SVSAPTTPAARTSSAIPSSA 639
            .|  :.|...:::...::.:     :.::.:||.|...::     :.|.||...|.:|       
Zfish   547 TVSLSLRGILQLLRQDNASSLRRRRRPRFVRRAVRRLRRWGLIPRATSRPTQTTASSS------- 604

  Fly   640 LVQQRERTTSTT--------TTSTTTSTTTSSITSTPSITSTT-------LIPINAATSEPNPYE 689
              ||.|...|:|        .:|..|...:.|:|....::..|       ..|.:.:...|.|::
Zfish   605 --QQTEAANSSTQPSQSSPGASSVATEAFSQSLTQKLGLSQQTETQQQAEAPPPSPSPPPPFPFQ 667

  Fly   690 VVTSLGG--CPPQELRCVSGKCITVSQLCDKQIDCPDAADELMCVY--------RERPSRRRLTS 744
            .|.|...  .||                    |..|.::..|..::        |.|||    .|
Zfish   668 PVESAEAQQTPP--------------------ITAPPSSPSLASLFHTLGRSISRFRPS----PS 708

  Fly   745 TTAPPTTSSAPPETSTATTTTG----PLSSTRRSLRTTP 779
            ||:.|.  ||.|..|::::...    |||....|....|
Zfish   709 TTSLPL--SASPSFSSSSSEDEVLLIPLSDDTTSEDDVP 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 20/129 (16%)
LDLa 432..464 CDD:238060 10/46 (22%)
LDLa 470..505 CDD:238060 16/34 (47%)
LDLa 697..731 CDD:238060 5/33 (15%)
lrp10XP_688859.4 CUB 36..136 CDD:238001
LDLa 142..181 CDD:238060 3/5 (60%)
CUB 229..334 CDD:412131 18/111 (16%)
LDLa 378..424 CDD:238060 10/46 (22%)
LDLa 427..461 CDD:238060 16/34 (47%)
Blue background indicates that the domain is not in the aligned region.

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