DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and lrp1bb

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_073769005.1 Gene:lrp1bb / 559293 ZFINID:ZDB-GENE-070912-401 Length:4666 Species:Danio rerio


Alignment Length:453 Identity:106/453 - (23%)
Similarity:158/453 - (34%) Gaps:134/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 NSGCQSTMLPMCQGVLDYDLTFNREGAAPRDAVSMAAYDSLIRANCSVRAAEFICGALEPECRPL 375
            |.||....|....|        ..:.|.|.: ..:||.:....:||:  |::|.||.  .||.|.
Zfish  3315 NGGCSHLCLLSPGG--------GHKCACPTN-FYLAADNKTCLSNCT--ASQFRCGT--DECIPF 3366

  Fly   376 --------HIG------------QLPPCRRICKAILEACSIPIYNSDVLGELFDCNLYPDAHESH 420
                    ..|            :..|.|..|...|  |::|.:..|  || .||.   |..:..
Zfish  3367 WWKCDTVDDCGDGSDEPADCPEFKCQPGRFQCGTGL--CALPPFICD--GE-NDCG---DNSDEA 3423

  Fly   421 KCEDPTRRRDY-CYGNEFQC-HDGSCIPQNWQCDKIKDCQGGEDEDEQC--LVCEPDEFRCRSNE 481
            .|:      .| |...:|:| ....|||.|.:|:...||..||||.: |  ..|.||:|:|:::.
Zfish  3424 NCD------TYICLSGQFKCSRKQKCIPLNLRCNGQDDCGDGEDETD-CPESTCSPDQFQCKASM 3481

  Fly   482 KCLVEKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPRVFTYASFLSPNETNDKVYTY 546
            .|:.:.:.||::.||.|||||.:|||...|             |..|..       |.|:.:..:
Zfish  3482 HCISKLWVCDEDPDCADGSDEANCDEKTCG-------------PHEFRC-------ENNNCIPDH 3526

  Fly   547 ITATTDEDAGTETKFQ-------IHQVAAPAPPVNSSAEEGAGGPKGFVNFRDSKEIMMTSDSET 604
            ....:..|.|..:..:       .|:..|.|.....||.....|.....:..|.|: ..|..:|.
Zfish  3527 WRCDSQNDCGDNSDEEHCKPVTCNHKDFACANGDCISARFRCDGDYDCADNSDEKD-CETHCAED 3590

  Fly   605 KFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRERTTSTTTTSTTTSTTTSSITSTPS 669
            :|:                     ...:..|....|...:|                        
Zfish  3591 QFQ---------------------CHNNLCISRKWLCDGQE------------------------ 3610

  Fly   670 ITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITVSQLCDKQIDCPDAADELMCV 732
                     :..|.|.....:.|.|..|...|..|.||.|::.|..||...:|.|::||:.||
Zfish  3611 ---------DCKTGEDERNCLGTVLPSCSLNEYVCASGGCVSASLRCDGHDNCLDSSDEMDCV 3664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 30/132 (23%)
LDLa 432..464 CDD:238060 13/32 (41%)
LDLa 470..505 CDD:238060 15/34 (44%)
LDLa 697..731 CDD:238060 13/33 (39%)
lrp1bbXP_073769005.1 None

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