DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and Cd320

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_062294.3 Gene:Cd320 / 54219 MGIID:1860083 Length:260 Species:Mus musculus


Alignment Length:168 Identity:43/168 - (25%)
Similarity:67/168 - (39%) Gaps:59/168 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 RRDYCYGNEFQC-HDGSCIPQNWQCDKIKDCQGGEDEDE----------QCL------------- 468
            |.|.|..:.||| ..|.|:|.:|:||..:||..|.||::          ||.             
Mouse    43 RADSCPTDTFQCLTSGYCVPLSWRCDGDQDCSDGSDEEDCRIESCAQNGQCQPQSALPCSCDNIS 107

  Fly   469 ---------------VCEPDEFRCRSNEKCLVEKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDE 518
                           .|:..|..|..::.|:...:|||.:.||:|.|||..||          .:
Mouse   108 GCSDVSDKNLNCSRPPCQESELHCILDDVCIPHTWRCDGHPDCLDSSDELSCD----------TD 162

  Fly   519 SELNAFPRVF-------TYASFLSPNETNDKVYTYITA 549
            :|::   ::|       |..|....|||:.:..|:.:|
Mouse   163 TEID---KIFQEENATTTRISTTMENETSFRNVTFTSA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549
LDLa 432..464 CDD:238060 14/32 (44%)
LDLa 470..505 CDD:238060 13/34 (38%)
LDLa 697..731 CDD:238060
Cd320NP_062294.3 LDLa 47..82 CDD:238060 15/34 (44%)
LDLa 124..159 CDD:238060 13/34 (38%)
Blue background indicates that the domain is not in the aligned region.

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