DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and sorl1

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_005157607.1 Gene:sorl1 / 497306 ZFINID:ZDB-GENE-050208-22 Length:2213 Species:Danio rerio


Alignment Length:935 Identity:189/935 - (20%)
Similarity:288/935 - (30%) Gaps:339/935 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEQKQLEAIANETSSVTGLRRQPTKYPHGLNITVQTIDDDNEGSPKDHSDYTRASGDSCWSKTQ 65
            ::|...||....:......|...|...|.|      |....::|       |.:.|||||     
Zfish   691 LSEDLSLEVCVPDPEFSGNLYAPPVPCPVG------TTYHRSKG-------YRKVSGDSC----- 737

  Fly    66 KYHIGMLGSPETLAELQVRRYKYPLTANYYLNSKLERPEKPTP------WMLLGYARSVCRWKYL 124
                       |..:::.|               |:....|.|      ::|.....|:.|:...
Zfish   738 -----------TGGDVEAR---------------LDGENLPCPVGESNEFILYAVRNSIHRYDLA 776

  Fly   125 -----RWPIIFV-ASVLLFFGLITYCLWLHDVSVARAKFLQRRYEATLTSTSSSSNEVWDEETTS 183
                 :.|:..: .:|.|.|.....||:..|:|:   ..:||     |....||..||..:....
Zfish   777 SGTDQQLPLTGLHEAVALDFDYEKNCLYWADISL---DTIQR-----LCMNGSSGQEVIVKRDLQ 833

  Fly   184 STER-SPQETTRLEDMDDSDESTELPEIAFGDDGDPEAGGEDGDGDYDDT--------------L 233
            :.|. |....:||              :.:.|.|..:....:.|||...|              |
Zfish   834 NVEALSFDPISRL--------------LYWVDAGAQKIEVSNSDGDLRRTLVNSSVVDQPRALAL 884

  Fly   234 LPADSIRF-TSGHQNSFGV----------------------PIEQDKRMLQ-------------- 261
            :||:|:.| |.....:.||                      .|..|:..|.              
Zfish   885 MPAESLMFWTDWGDRAAGVYRSWMDGSNISCIVSEGVRWPNGITADESWLYWTEAYGDRIERADF 949

  Fly   262 -------LLKELLH-----------------------KPQATPAGNEPTLTRVSPTLPPPLSASG 296
                   :::.|.|                       .|::....:|..:.|::..:...:...|
Zfish   950 NGGSRTVIMEGLPHPYAIAVFKNDLYWDDWSRMGIFKAPKSGSPDSELIVGRLTGVMDLKIFYKG 1014

  Fly   297 R----------PTEAMALTTPSTTN-----SGCQSTMLP----MCQGVLDYDLTFN-----REGA 337
            :          |...:.|..|....     .|..:::||    .||....|.|..|     ....
Zfish  1015 KNRGQNACADQPCSLLCLPQPGNQRHCVCPDGVPTSVLPSGERQCQCPSGYQLHNNTCVKTEHTC 1079

  Fly   338 APRD--AVSMAAYDSLIRANCSVRAAEFICGAL--EPECRPLHIGQLPPCRRICKAILEACSIPI 398
            .|..  ..:.....|:.:.:     ::..||.:  |.||......  |..:..|  :.....||:
Zfish  1080 LPNQHRCANGKCISSIWKCD-----SDNDCGDMSDEQECPTTSCD--PSVQFRC--VASGSCIPL 1135

  Fly   399 Y----NSDVLGELFDCNLYPDAH-ESHKC-------------EDPTR------RRDY-------- 431
            .    :.|..|:..|     :.| |||||             .|..|      .||:        
Zfish  1136 AFKCDHEDDCGDNSD-----EEHCESHKCGPGEFTCARGACIRDAWRCDGDNDCRDWSDEANCTV 1195

  Fly   432 ----CYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDED-EQCLVCEPDEFRCRSNEKCLVEKYRCD 491
                |..:.||||.|.||||.|.||...|||.|.||| .||...:.:.|.| ||..||.....|:
Zfish  1196 GHHTCESSSFQCHTGHCIPQRWVCDGDDDCQDGSDEDPTQCGRQKCNGFLC-SNGTCLPASAHCN 1259

  Fly   492 QNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPRVFTYASFLSPNETNDKVYTYITATT----- 551
            ...||..|:|||:|.                  |....|..|:..|.......:.:...|     
Zfish  1260 GVEDCPGGADEQNCG------------------PLCAHYMEFVCRNRAQCLFQSLVCDGTRHCAD 1306

  Fly   552 --DED---AGTETKFQIHQVAAPAPPVNSSAEEGAGGPKGFVNFRDSKEIMMTSD-----SETKF 606
              |||   ||..|..:..:..                 .|: ||:.:..:.:|.:     .:...
Zfish  1307 GSDEDPIYAGCSTSVEFEKTC-----------------DGY-NFQCTNGMCVTLEWKCDGMDDCG 1353

  Fly   607 KYSQRANRTSVKFSVSAPTTPAARTS---------SAIPSSALVQQRERTTSTTTTSTTTSTTTS 662
            .||..||       .::||.....||         ..:|:   ..:.:........|..:..:..
Zfish  1354 DYSDEAN-------CASPTEEPGCTSYFRFECKNGRCVPA---WWKCDGENDCGDWSDESQCSGG 1408

  Fly   663 SITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITVSQLCDKQIDCPDAAD 727
            ....||:               |.|       ..|.|...||.||.||..:.:||...||||::|
Zfish  1409 EALHTPA---------------PGP-------ATCAPNRFRCGSGACIVDTWVCDGYADCPDSSD 1451

  Fly   728 ELMCVYRERPS-RRRLTS-TTAPPT 750
            |..|     |: :..:|| ||.||:
Zfish  1452 EAGC-----PTVKGSVTSVTTLPPS 1471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 28/143 (20%)
LDLa 432..464 CDD:238060 18/31 (58%)
LDLa 470..505 CDD:238060 13/34 (38%)
LDLa 697..731 CDD:238060 16/33 (48%)
sorl1XP_005157607.1 VPS10 130..754 CDD:214740 19/106 (18%)
Sortilin_C 589..754 CDD:292523 19/106 (18%)
LY 781..822 CDD:214531 11/48 (23%)
LY 825..864 CDD:214531 8/52 (15%)
LY 868..912 CDD:214531 9/43 (21%)
LY 916..954 CDD:214531 3/37 (8%)
LDLa 1079..1113 CDD:238060 5/38 (13%)
LDLa 1118..1154 CDD:238060 7/44 (16%)
LDLa 1159..1193 CDD:238060 5/33 (15%)
LDLa 1242..1273 CDD:238060 13/31 (42%)
LDLa 1282..1310 CDD:197566 3/27 (11%)
LDLa 1327..1361 CDD:238060 8/58 (14%)
LDLa 1376..1405 CDD:238060 2/31 (6%)
LDLa 1421..1455 CDD:238060 16/33 (48%)
LDLa 1474..1509 CDD:238060
LDLa 1522..1551 CDD:238060
FN3 1559..>1630 CDD:238020
FN3 1653..1743 CDD:238020
FN3 1750..1827 CDD:238020
FN3 1931..2007 CDD:238020
FN3 2022..2097 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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