| Sequence 1: | NP_609130.1 | Gene: | CG6739 / 34037 | FlyBaseID: | FBgn0031926 | Length: | 787 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005155618.1 | Gene: | vldlr / 393897 | ZFINID: | ZDB-GENE-040426-803 | Length: | 877 | Species: | Danio rerio |
| Alignment Length: | 461 | Identity: | 106/461 - (22%) |
|---|---|---|---|
| Similarity: | 149/461 - (32%) | Gaps: | 175/461 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 318 MLPMCQGVLDYDLTFNREGAAPRDAVSMAAYDSLIRANCSVRAAEFICGALEPECRPLHIGQLPP 382
Fly 383 C----------------RRICKAILEACSIPIYNSDVLGELFDCNLYPDAHESHKCED------- 424
Fly 425 --PTRRRDYCYGNEFQCHDGS--CIPQNWQCDKIKDCQGGEDEDEQC--LVCEPDEFRCRSNEKC 483
Fly 484 LVEKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPRVFTYASFLSPNETNDKVYTYIT 548
Fly 549 AT--TDEDAGTETKFQI------HQVAAPAPPVNSSAEE---GAG----------GPKGFVNFRD 592
Fly 593 SKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRERTTSTTTTSTTT 657
Fly 658 STTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITVSQLCDKQIDC 722
Fly 723 PDAADE 728 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG6739 | NP_609130.1 | CRD_FZ | 314..427 | CDD:143549 | 21/133 (16%) |
| LDLa | 432..464 | CDD:238060 | 19/33 (58%) | ||
| LDLa | 470..505 | CDD:238060 | 17/34 (50%) | ||
| LDLa | 697..731 | CDD:238060 | 14/32 (44%) | ||
| vldlr | XP_005155618.1 | LDLa | 29..63 | CDD:238060 | 7/41 (17%) |
| LDLa | 67..99 | CDD:197566 | 8/41 (20%) | ||
| Ldl_recept_a | 107..145 | CDD:278486 | 21/41 (51%) | ||
| Ldl_recept_a | 149..184 | CDD:278486 | 17/35 (49%) | ||
| Ldl_recept_a | 234..269 | CDD:278486 | 7/34 (21%) | ||
| Ldl_recept_a | 272..308 | CDD:278486 | 6/72 (8%) | ||
| LDLa | 316..346 | CDD:238060 | 12/47 (26%) | ||
| FXa_inhibition | 356..390 | CDD:291342 | |||
| EGF_CA | 392..426 | CDD:214542 | |||
| NHL | 479..>570 | CDD:302697 | |||
| LY | 504..541 | CDD:214531 | |||
| NHL repeat | 511..551 | CDD:271320 | |||
| Ldl_recept_b | 564..604 | CDD:278487 | |||
| LY | 588..630 | CDD:214531 | |||
| Ldl_recept_b | 651..690 | CDD:278487 | |||
| FXa_inhibition | 707..745 | CDD:291342 | |||
| Mucin | <723..817 | CDD:250634 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||