Protein Alignment CG6739 and cue

DIOPT Version :10

• Sequence 1: NP_609130.1
• Gene: CG6739 / 34037
• FlyBaseID: FBgn0031926
• Length: 787
• Species: Drosophila melanogaster
• Sequence 2: NP_612113.2
• Gene: cue / 38174
• FlyBaseID: FBgn0011204
• Length: 644
• Species: Drosophila melanogaster
• Alignment Length: 595
• Identity: 99/595 - (16%)
• Similarity: 181/595 - (30%)
• Gaps: 217/595 - (36%)

  Fly    10 IANETSSVTGLRRQPTKYPHGLNITVQTIDDDNEGSPKDHSDYTRASGDSCWSKTQKYHIGML-- 72
            :.:...|:..|:|......|....|:....:::.|.    ..|...:.:..||.|::..|...
  Fly    78 LKHRNGSIFSLKRDLIAANHVAEQTIARTGNESVGG----LAYDPLNMNLFWSDTEQRKIFFAPI 138

  Fly    73 ---GSPETLAELQVRRYKYPLTANYYLNSKLERPEKPTPWMLLGYARSVCRWKYLRW-------- 126
               .:|:.|.:               |:::..||:        |.|..|||.| |.|
  Fly   139 HGSATPQVLVD---------------LSAEGGRPD--------GVAVDVCRRK-LYWTNSNVTHP 179

  Fly   127 ------------PIIFVASVLLFFGLITYCL-----WLHDV-----SVARAKF--------LQRR 161
                        .:|..:::.:..|::...|     |:.|:     ||..:|.        |:.:
  Fly   180 TVERINLDGSNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDK 244

  Fly   162 YEATLTSTSSSSNEVWDEETTSSTERSPQ------ETTRLEDMDDSDESTELPEIAFGDDGDPEA 220
            :...|....::....|.:.||.:....|:      .||...|.:||.:||        |..|||.
  Fly   245 HHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVTTTSKPDEEDSTDST--------DFKDPEP 301

  Fly   221 GGEDGDGDYDDTLLPADSIRFTSGHQNSFGV--------PIEQDKRMLQLLKELLHKPQATPAGN 277
            ..||           ...:|..:..:.:.|:        .:::|.....:::::..:
  Fly   302 VAED-----------CPLVRVANLSEEARGIVARTGFYQRLQKDHHCASIVRKVKER-------- 347

  Fly   278 EPTLTRVSPTLPPPLSASGRPTEAMALTTPSTTNSGCQSTMLPMCQGVLDYDLTFNREGAAPRDA 342
                          :....|..|..:|                     ||..:....:.....|.
  Fly   348 --------------VDEQSRKFEIRSL---------------------LDQKIKVLEDERCMNDG 377

  Fly   343 VSMAAYDSLI------RANCSVRAAEFICGALEPECRPLHIGQLPPCRRICKAILEACSIPIYNS 401
            ...||.|..|      .:.|.:|                      .|...|          ::.:
  Fly   378 EYRAATDLCICPTGFKGSRCEIR----------------------ECHNYC----------VHGT 410

  Fly   402 DVLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDEDEQ 466
            ..:.||    .||..:    |: |..:.:.|   |.....|.|:...       .|:..:||:|
  Fly   411 CQMSEL----AYPKCY----CQ-PGFKGERC---ELSVCSGLCLNGG-------HCRVSKDENE- 455

  Fly   467 CLVCE-PDEF---RCRSNEK------CLVEKYRCDQNI--DCMDGSDEQDCDEYGSGDLAPFDES 519
            ...|| |.:|   ||..|..      |.:.|:..:..:  .|....:|...|...:..:..:...
  Fly   456 APSCECPAKFGGARCEQNSTEICSLFCRLLKHEPEMYVPFGCHSICEELAQDNSTNIAIPQYQHL 520

  Fly   520 ELNAFPRVFT 529
            |:...|||:|
  Fly   521 EVCLTPRVWT 530

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6739	NP_609130.1	CRD_FZ	314..427	CDD:143549	17/118 (14%)
		LDLa	432..464	CDD:238060	6/31 (19%)
		LDLa	470..505	CDD:238060	11/46 (24%)
		LDLa	697..731	CDD:238060
cue	NP_612113.2	TerD_like	48..>85	CDD:473128	0/6 (0%)
		YvrE	<73..>164	CDD:442613	18/112 (16%)
		LY	101..141	CDD:214531	7/43 (16%)
		Ldl_recept_b	167..208	CDD:459654	5/41 (12%)
		LY	193..237	CDD:214531	8/43 (19%)