DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and Cd320

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001014223.1 Gene:Cd320 / 362851 RGDID:1305860 Length:264 Species:Rattus norvegicus


Alignment Length:199 Identity:50/199 - (25%)
Similarity:70/199 - (35%) Gaps:73/199 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 AHESHKCEDPTRRRDYCYGNEFQC-HDGSCIPQNWQCDKIKDCQGGEDEDE----------QC-- 467
            ||...:...|  |...|..:.|:| ..|.|:|.:|:||..:||..|.||:|          ||  
  Rat    37 AHTLVQVSGP--RAGSCPTDTFKCLTSGYCVPLSWRCDGDRDCSDGSDEEECRIEPCAQNRQCQP 99

  Fly   468 --------------------------LVCEPDEFRCRSNEKCLVEKYRCDQNIDCMDGSDEQDCD 506
                                      ..|:..|.||..::.|:...:|||.:.||.|.|||..||
  Rat   100 QPALPCSCDNISGCSAGSDKNLNCSRSPCQEGELRCILDDVCIPHTWRCDGHPDCPDSSDELSCD 164

  Fly   507 EYGSGDLAPFDESELNAFPRVFTYASFLSPNETNDKVYTYITATTDEDA---GTETKFQIHQVAA 568
                                        :..|| ||::....|||...:   ..||.|:...||:
  Rat   165 ----------------------------TDTET-DKIFQEENATTSMSSMIVEKETSFRNVTVAS 200

  Fly   569 PAPP 572
            ...|
  Rat   201 AGHP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 3/10 (30%)
LDLa 432..464 CDD:238060 13/32 (41%)
LDLa 470..505 CDD:238060 14/34 (41%)
LDLa 697..731 CDD:238060
Cd320NP_001014223.1 LDLa 51..86 CDD:238060 14/34 (41%)
LDLa 128..163 CDD:238060 14/34 (41%)
Blue background indicates that the domain is not in the aligned region.

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