DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and Lrp1

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_008763615.1 Gene:Lrp1 / 299858 RGDID:1307535 Length:4562 Species:Rattus norvegicus


Alignment Length:808 Identity:148/808 - (18%)
Similarity:210/808 - (25%) Gaps:326/808 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LGYARSVCRWKYLRWPIIFVASVLLFFGLITYCLWLHDVSVARAKFLQRRYEATLTSTSSSSNEV 176
            |.|.|.   |..|.|.           ...|..:..|.|...|....:|....|::........|
  Rat  2306 LAYHRG---WDTLYWT-----------SYTTSTITRHTVDQTRPGAFERETVITMSGDDHPRAFV 2356

  Fly   177 WDE-----------ETTSSTERSPQETTRLEDMDDSDEST--------ELPEIAFGDDGDPEAGG 222
            .||           |...|..|:......:..:.:.|..|        ...::.|.|....:...
  Rat  2357 LDECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIER 2421

  Fly   223 EDGDGDYDDTLLPADSIRFTSGHQNSFGVPIEQD--------KRMLQLLKELLHKPQATPAGNEP 279
            .:.||.:...:|.::.:       :.||:.:..:        :|.:|...:.:        |::.
  Rat  2422 CEYDGSHRYVILKSEPV-------HPFGLAVYGEHIFWTDWVRRAVQRANKYV--------GSDM 2471

  Fly   280 TLTRVS-PTLPPPLSASGRPTEAMALTTPSTTNSGCQSTMLPMCQGVLDYDLTFNREGAAPRDAV 343
            .|.||. |..|..:.|....|.:..|:.....|.|||...|...||                   
  Rat  2472 KLLRVDIPQQPMGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQG------------------- 2517

  Fly   344 SMAAYDSLIRANCSVRAA-----EFICGALEPECR---------------PLHIGQLPPCR---- 384
                     ..|||.|..     :|.|.|:...||               .|....:..|:    
  Rat  2518 ---------HVNCSCRGGRILQEDFTCRAMNSSCRAQDEFECANGECISFSLTCDGVSHCKDKSD 2573

  Fly   385 --------RICKAILEACS-----------------------IP------------------IYN 400
                    |.||.....|:                       ||                  |.|
  Rat  2574 EKPSYCNSRRCKKTFRQCNNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGN 2638

  Fly   401 SDVLGELFDCNLYPDAHESHKCE-----------------DPTRRRDYCYG-------------- 434
            |....:..||.   ||.:...|.                 .|..|...||.              
  Rat  2639 SSRCNQFVDCE---DASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDY 2700

  Fly   435 ----------------NEFQCHDGSCIPQNWQCDKIKDCQGGEDEDEQCLVCEPDEFRCRSNEKC 483
                            |.|.|..|.|||.:|.|||..||:.||||......|...:|.|: |.:|
  Rat  2701 SDERDCPGVKRPRCPLNYFACPSGRCIPMSWTCDKEDDCENGEDETHCNKFCSEAQFECQ-NHRC 2764

  Fly   484 LVEKYRCDQNIDCMDGSDEQD--------------------------CDEYGSGDLAPFDESELN 522
            :.:::.||.:.||.|||||..                          ||  |..|.|...:..::
  Rat  2765 ISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCD--GDKDCADGADESIS 2827

  Fly   523 A---FPRVFTYASFLSPNETNDKVYTYITATTDEDAGTETKFQIHQVAAPAPPVNSSAEEGAGGP 584
            |   :........|:..|..  .:..:.....|.|            .|.....:...|....||
  Rat  2828 AGCLYNSTCDDREFMCQNRL--CIPKHFVCDHDRD------------CADGSDESPECEYPTCGP 2878

  Fly   585 KGF--VNFRDSKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRERT 647
            ..|  .|.|.........|.|....          ..|..||..|..                  
  Rat  2879 NEFRCANGRCLSSRQWECDGENDCH----------DHSDEAPKNPHC------------------ 2915

  Fly   648 TSTTTTSTTTSTTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITV 712
                 ||.......||                                     :..|.||:|:..
  Rat  2916 -----TSPEHKCNASS-------------------------------------QFLCSSGRCVAE 2938

  Fly   713 SQLCDKQIDCPDAADELMCVYRERPSRR 740
            :.||:.|.||.|.:||..|...|..||:
  Rat  2939 ALLCNGQDDCGDGSDERGCHVNECLSRK 2966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 31/202 (15%)
LDLa 432..464 CDD:238060 18/61 (30%)
LDLa 470..505 CDD:238060 14/60 (23%)
LDLa 697..731 CDD:238060 12/33 (36%)
Lrp1XP_008763615.1 LDLa 27..60 CDD:197566
LDLa 72..105 CDD:197566
FXa_inhibition 120..149 CDD:464251
FXa_inhibition 159..189 CDD:464251
LY 276..315 CDD:214531
LY 317..359 CDD:214531
LY 362..402 CDD:214531
FXa_inhibition 487..520 CDD:464251
LY 552..594 CDD:214531
LY 595..634 CDD:214531
LY 641..690 CDD:214531
LY <701..734 CDD:214531
FXa_inhibition 808..843 CDD:464251
LDLa 854..886 CDD:197566
LDLa 896..929 CDD:238060
LDLa 936..968 CDD:197566
LDLa 979..1012 CDD:238060
LDLa 1033..1066 CDD:238060
LDLa 1080..1115 CDD:238060
LDLa 1122..1158 CDD:238060
LDLa 1163..1196 CDD:238060
FXa_inhibition 1203..1239 CDD:464251
Vgb 1328..>1521 CDD:443399
LY 1354..1394 CDD:214531
LY 1398..1441 CDD:214531
LY 1631..1667 CDD:214531
LY 1668..1711 CDD:214531
LY 1715..1752 CDD:214531
LY 1752..1793 CDD:214531
FXa_inhibition 1868..1904 CDD:464251
LY 1934..1974 CDD:214531
LY 1977..2017 CDD:214531
LY 2018..2061 CDD:214531
LY 2063..2105 CDD:214531
FXa_inhibition 2177..2212 CDD:464251
LY 2293..2333 CDD:214531 9/40 (23%)
Ldl_recept_b 2362..2404 CDD:459654 5/41 (12%)
LY 2388..2429 CDD:214531 6/40 (15%)
FXa_inhibition 2500..2532 CDD:464251 11/59 (19%)
LDLa 2545..2575 CDD:238060 2/29 (7%)
LDLa 2584..2618 CDD:238060 4/33 (12%)
LDLa 2623..2657 CDD:238060 7/36 (19%)
LDLa <2684..2706 CDD:238060 2/21 (10%)
LDLa 2714..2748 CDD:238060 17/33 (52%)
LDLa 2752..2783 CDD:197566 12/31 (39%)
LDLa 2791..2824 CDD:197566 5/34 (15%)
LDLa 2835..2867 CDD:197566 5/45 (11%)
LDLa 2875..2908 CDD:197566 8/42 (19%)
LDLa 2925..2957 CDD:238060 14/68 (21%)
cEGF 2982..3003 CDD:463661
EGF_CA 3000..>3029 CDD:214542
LY 3067..3111 CDD:214531
LY 3112..3154 CDD:214531
LY 3156..3198 CDD:214531
LY 3200..3241 CDD:214531
LY 3242..3282 CDD:214531
FXa_inhibition 3312..3348 CDD:464251
LDLa 3352..3383 CDD:238060
LDLa 3392..3426 CDD:238060
LDLa 3431..3466 CDD:238060
LDLa 3470..3503 CDD:197566
LDLa 3511..3544 CDD:197566
LDLa 3554..3588 CDD:238060
LDLa 3593..3627 CDD:238060
LDLa 3631..3665 CDD:238060
LDLa 3671..3703 CDD:197566
LDLa 3713..3749 CDD:238060
LDLa 3764..3794 CDD:238060
YncE 3880..4082 CDD:442618
LY 3973..4010 CDD:214531
Ldl_recept_b 4031..4072 CDD:459654
LY 4055..4096 CDD:214531
Blue background indicates that the domain is not in the aligned region.

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