DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and LRP12

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_038465.1 Gene:LRP12 / 29967 HGNCID:31708 Length:859 Species:Homo sapiens


Alignment Length:566 Identity:114/566 - (20%)
Similarity:171/566 - (30%) Gaps:230/566 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 ATPAGNEPTLTRVSPTLPPPLSASGRPTEAMALTTPS---TTNSGCQSTMLPMCQGVLDYDLTFN 333
            :|..|..|...|....:   :::.|.|:|..|....|   ..|.|...|:     ...|:|:..:
Human    44 STACGETPEQIRAPSGI---ITSPGWPSEYPAKINCSWFIRANPGEIITI-----SFQDFDIQGS 100

  Fly   334 REGAAPRDAVSMAAYDSLIRANCSVRAAEFICGALEPECRPLHIGQLPPCRRICKAILEACSIPI 398
            |.  ...|.:::..|.::.    |.||    ||:..|          ||.              |
Human   101 RR--CNLDWLTIETYKNIE----SYRA----CGSTIP----------PPY--------------I 131

  Fly   399 YNSDVLGELF--DCNL----YPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDC 457
            .:.|.:...|  |.|:    :..|:.|.|.|:|.     |..::|:|.:|.|||:.|:|:.:.:|
Human   132 SSQDHIWIRFHSDDNISRKGFRLAYFSGKSEEPN-----CACDQFRCGNGKCIPEAWKCNNMDEC 191

  Fly   458 QGGEDEDEQCLV-------------CEPDEFRCRSN----EKCLVEKYRCDQNIDCMDGSDEQDC 505
              |:..||:...             |..::|:|.|.    ..||.|..:||.||||:|..||.||
Human   192 --GDSSDEEICAKEANPPTAAAFQPCAYNQFQCLSRFTKVYTCLPESLKCDGNIDCLDLGDEIDC 254

  Fly   506 DEYGSGDLAPFDESELNAFPRVFTYASFLSPN---------------ETND-------------- 541
            |       .|.....|..|     |.:|.|||               :|.|              
Human   255 D-------VPTCGQWLKYF-----YGTFNSPNYPDFYPPGSNCTWLIDTGDHRKVILRFTDFKLD 307

  Fly   542 --------KVYTYITATTDEDAGTETKFQIHQVAAPAPPVNSSAE-------EGAGGPKGF---- 587
                    |:|..:.....:.....|.|..|   ||...|:||.:       :.....:||    
Human   308 GTGYGDYVKIYDGLEENPHKLLRVLTAFDSH---APLTVVSSSGQIRVHFCADKVNAARGFNATY 369

  Fly   588 --------------------------------VNFRDSKEIMMTSDSETKFKYSQRANRTSVKFS 620
                                            .|.||.....|....|                 
Human   370 QVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDETNCTMCQKEE----------------- 417

  Fly   621 VSAPTTPAARTSSAIPSSALVQQRERTTSTTTTSTTTSTTTSSITSTPSITSTTLIPINAATSEP 685
                 .|.:|.....|.|.....:....:                               .:.|.
Human   418 -----FPCSRNGVCYPRSDRCNYQNHCPN-------------------------------GSDEK 446

  Fly   686 NPYEVVTSLGGCPPQELRCVSGKCITVSQLCDKQIDCPDAADELMC 731
            |.:       .|.|....|.:.:|:..|.:||.|.||.|.:||..|
Human   447 NCF-------FCQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEENC 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 24/118 (20%)
LDLa 432..464 CDD:238060 11/31 (35%)
LDLa 470..505 CDD:238060 16/38 (42%)
LDLa 697..731 CDD:238060 13/33 (39%)
LRP12NP_038465.1 CUB 47..158 CDD:238001 30/152 (20%)
LDLa 166..200 CDD:238060 13/35 (37%)
LDLa 215..254 CDD:238060 16/38 (42%)
CUB 267..371 CDD:238001 19/106 (18%)
LDLa 375..410 CDD:238060 3/34 (9%)
LDLa 413..448 CDD:238060 6/87 (7%)
LDLa 451..485 CDD:238060 13/33 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 623..678
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..723
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 748..770
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 801..823
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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