| Sequence 1: | NP_609130.1 | Gene: | CG6739 / 34037 | FlyBaseID: | FBgn0031926 | Length: | 787 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_037287.2 | Gene: | Vldlr / 25696 | RGDID: | 3963 | Length: | 873 | Species: | Rattus norvegicus |
| Alignment Length: | 412 | Identity: | 96/412 - (23%) |
|---|---|---|---|
| Similarity: | 133/412 - (32%) | Gaps: | 163/412 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 338 APRDAVSMAAYDSLIRANCSVRAAEFICGALEPECRPLHIGQLPPCRRICKAILEACSIPIYNSD 402
Fly 403 VLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDED-EQ 466
Fly 467 C--LVCEPDEFRC--RSNEKCLVEKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPRV 527
Fly 528 FTYASFLSPNETNDKVYTYITATTDEDAGTETKFQIHQVAAPAPPVNSSAEEGAGGPKGFV-NFR 591
Fly 592 DSKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPA----ARTSSAIPSSALVQQRERTTSTTT 652
Fly 653 TSTTTSTTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCITVSQLCD 717
Fly 718 KQIDCPDAADELMCVYRERPSR 739 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG6739 | NP_609130.1 | CRD_FZ | 314..427 | CDD:143549 | 18/88 (20%) |
| LDLa | 432..464 | CDD:238060 | 14/31 (45%) | ||
| LDLa | 470..505 | CDD:238060 | 15/36 (42%) | ||
| LDLa | 697..731 | CDD:238060 | 15/33 (45%) | ||
| Vldlr | NP_037287.2 | LDLa | 33..67 | CDD:238060 | 10/65 (15%) |
| LDLa | 71..103 | CDD:197566 | 14/36 (39%) | ||
| Ldl_recept_a | 111..149 | CDD:395011 | 15/38 (39%) | ||
| Ldl_recept_a | 153..188 | CDD:395011 | 9/73 (12%) | ||
| LDLa | 192..224 | CDD:197566 | 10/46 (22%) | ||
| Ldl_recept_a | 237..273 | CDD:395011 | 16/38 (42%) | ||
| Ldl_recept_a | 276..312 | CDD:395011 | 1/1 (100%) | ||
| Ldl_recept_a | 320..350 | CDD:395011 | |||
| FXa_inhibition | 360..394 | CDD:405372 | |||
| EGF_CA | 396..426 | CDD:214542 | |||
| LDL-receptor class B 1 | 439..480 | ||||
| LY | 461..499 | CDD:214531 | |||
| LDL-receptor class B 2 | 481..524 | ||||
| Ldl_recept_b | 481..521 | CDD:395012 | |||
| LY | 508..547 | CDD:214531 | |||
| LDL-receptor class B 3 | 525..567 | ||||
| LDL-receptor class B 4 | 568..611 | ||||
| Ldl_recept_b | 568..608 | CDD:395012 | |||
| LY | 592..634 | CDD:214531 | |||
| LDL-receptor class B 5 | 612..654 | ||||
| LDL-receptor class B 6 | 655..697 | ||||
| Ldl_recept_b | 655..694 | CDD:395012 | |||
| FXa_inhibition | 706..749 | CDD:405372 | |||
| Clustered O-linked oligosaccharides | 751..790 | ||||
| Endocytosis signal. /evidence=ECO:0000255 | 832..837 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||