DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and Lrp12

DIOPT Version :10

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_006520965.1 Gene:Lrp12 / 239393 MGIID:2443132 Length:859 Species:Mus musculus


Alignment Length:410 Identity:84/410 - (20%)
Similarity:121/410 - (29%) Gaps:183/410 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 KCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDEDEQCLVCEPD------------ 473
            |.|.|.     |..::|:|.:|.|||:.|:|:.:.:|  |:..||:  ||..|            
Mouse   161 KSEQPD-----CACDQFRCGNGKCIPEAWKCNSMDEC--GDSSDEE--VCASDAHPPTTTAFQPC 216

  Fly   474 ---EFRCRSN----EKCLVEKYRCDQNIDCMDGSDEQDCDEYGSGDLAPFDESELNAFPRVFTYA 531
               :|:|.|.    ..||.|..:||.||||:|..||.|||....|....            :.|.
Mouse   217 AYNQFQCLSRFTKVYTCLPESLKCDGNIDCLDLGDEIDCDMPTCGQWLK------------YFYG 269

  Fly   532 SFLSPN---------------ETND----------------------KVYTYITATTDEDAGTET 559
            :|.|||               :|.|                      |:|..:.....:.....|
Mouse   270 TFNSPNYPDFYPPGSNCTWLIDTGDHRKVILRFTDFKLDGTGYGDYVKIYDGLEENPRKLLRVLT 334

  Fly   560 KFQIHQVAAPAPPVNSSAE-------EGAGGPKGF------------------------------ 587
            .|..|   ||...|:||.:       :.....:||                              
Mouse   335 AFDSH---APLTVVSSSGQIRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRC 396

  Fly   588 ------VNFRDSKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRER 646
                  .|.||  ||..|...:.:|                    |.:|.....|.|.....:..
Mouse   397 DGYWHCPNGRD--EINCTMCQKEEF--------------------PCSRNGVCYPRSDRCNYQNH 439

  Fly   647 TTSTTTTSTTTSTTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQELRCVSGKCIT 711
            ..:                               .:.|.|.:       .|.|....|.:.:|:.
Mouse   440 CPN-------------------------------GSDEKNCF-------FCQPGNFHCKNNRCVF 466

  Fly   712 VSQLCDKQIDCPDAADELMC 731
            .|.:||.|.||.|.:||..|
Mouse   467 ESWVCDSQDDCGDGSDEENC 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 3/5 (60%)
LDLa 432..464 CDD:238060 11/31 (35%)
LDLa 470..505 CDD:238060 17/53 (32%)
LDLa 697..731 CDD:238060 13/33 (39%)
Lrp12XP_006520965.1 CUB 56..158 CDD:238001
LDLa 167..201 CDD:238060 13/37 (35%)
LDLa 216..255 CDD:238060 15/38 (39%)
CUB 268..372 CDD:238001 19/106 (18%)
LDLa 414..449 CDD:238060 6/85 (7%)
LDLa 452..486 CDD:238060 13/33 (39%)
Blue background indicates that the domain is not in the aligned region.

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