DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and LDLRAD3

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_777562.1 Gene:LDLRAD3 / 143458 HGNCID:27046 Length:345 Species:Homo sapiens


Alignment Length:380 Identity:76/380 - (20%)
Similarity:124/380 - (32%) Gaps:135/380 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 VLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDEDEQC 467
            :|....:..|.|..:.:::|..|        || |.|.:|.|||..||||.:.||....||.| |
Human    10 LLSSAAESQLLPGNNFTNECNIP--------GN-FMCSNGRCIPGAWQCDGLPDCFDKSDEKE-C 64

  Fly   468 ----LVCEPDEFRCRSNEKCLVEKYRCDQNIDCMDGSDEQDC----------------------- 505
                ..|.|..|.|.|...|::.::||:...||.|||||::|                       
Human    65 PKAKSKCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENCTANPLLCSTARYHCKNGLCIDKS 129

  Fly   506 ---------------------DEYGSGDLAPFDESELNAFPRVFTYASFLSPNETNDKVYTYITA 549
                                 .|.|||.:....|::|..:|.: |||...|     ..::..:.|
Human   130 FICDGQNNCQDNSDEESCESSQEPGSGQVFVTSENQLVYYPSI-TYAIIGS-----SVIFVLVVA 188

  Fly   550 TT------DEDAGTETKFQIHQVAAPA------------------------PPVNSSAEEGA--- 581
            ..      ...........:|::..|.                        ..|.|.||:.|   
Human   189 LLALVLHHQRKRNNLMTLPVHRLQHPVLLSRLVVLDHPHHCNVTYNVNNGIQYVASQAEQNASEV 253

  Fly   582 GGPKGFVNFRDSKEIMMTSDSETKFKYSQRANRTSVKFSVSAPTTPAARTSSAIPSSALVQQRER 646
            |.|..:      .|.::  |....:              ...|..|.:..:.::..:.|...|.|
Human   254 GSPPSY------SEALL--DQRPAW--------------YDLPPPPYSSDTESLNQADLPPYRSR 296

  Fly   647 TTSTTTTSTTTSTTTSSITSTPSITSTTLIPINAATSEPNPYEVVTSLGGCPPQE 701
            :.|..:.|:..:::..|:..|           :.:..:|.|.|     |...|::
Human   297 SGSANSASSQAASSLLSVEDT-----------SHSPGQPGPQE-----GTAEPRD 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 5/23 (22%)
LDLa 432..464 CDD:238060 15/31 (48%)
LDLa 470..505 CDD:238060 15/34 (44%)
LDLa 697..731 CDD:238060 1/5 (20%)
LDLRAD3NP_777562.1 LDLa 32..64 CDD:238060 18/41 (44%)
LDLa 71..106 CDD:238060 15/34 (44%)
LDLa 113..147 CDD:238060 0/33 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..345 14/96 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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