DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp4f1

DIOPT Version :9

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:530 Identity:171/530 - (32%)
Similarity:264/530 - (49%) Gaps:65/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WILLGIAVLIMTLVWDNSRKQWRVNTF----EKSRILGPFTIPIVG------NGLQALTLRPENF 56
            |||    ..|:|.::...|...|:..|    :::.::|.     ||      .||:.||      
  Rat    29 WIL----AQILTQIYAAYRNFRRLRGFPQPPKRNWLMGH-----VGMVTPTEQGLKELT------ 78

  Fly    57 IQRFGDYFNKYGKTFRLWILGECLIYT---KDLKYFESIL--SSSTLLKKAHLYRFLRDFLGDGL 116
                 .....|.:.|.:||.....:.|   .|:  ..|||  |::..||....|..|:.:|||||
  Rat    79 -----RLVGTYPQGFLMWIGPMVPVITLCHSDI--VRSILNASAAVALKDVIFYTILKPWLGDGL 136

  Fly   117 LLSTGNKWTSRRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKN-YADGKTCVDLFKFVSLEALD 180
            |:|.|:||:..|::|.|||||..|:.:|:|.:.::.||..|.|. .::|.:.:|:|:.|||..||
  Rat   137 LVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWKRLISEGSSRLDMFEHVSLMTLD 201

  Fly   181 VTTETAMGVQVNAQNEPNFPYTKALKSVVYIESKR----LASVSMRYNWLFPLAAPLVYRRLQKD 241
            ...:.......|.| |.:..|..|:..:..:.:||    |..:.:.|| |.|..     .|..|.
  Rat   202 SLQKCVFSFDSNCQ-EKSSEYIAAILELSALVAKRHQQPLLFMDLLYN-LTPDG-----MRFHKA 259

  Fly   242 IAIMQDFTDKVIRERRAILERARADGTYKPLIMGDDDIGGKAKMTLLD----ILLQATIDNKPLS 302
            ..::.:|||.||||||..|.....|...|          .|||...||    :||....|.|.||
  Rat   260 CNLVHEFTDAVIRERRRTLPDQGLDEFLK----------SKAKSKTLDFIDVLLLTKDEDGKELS 314

  Fly   303 DVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELK 367
            |.|||.|.|.|:|.|.|||.||:|..|:.:::||:.||...:|:..:|.......:....|.:|.
  Rat   315 DEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIEWDDLAQLP 379

  Fly   368 YLDCVIKETMRLHPPVPILGRYIPEDLKIGE-ITIPGNTSILLMPYYVYRDPEYFPDPLVFKPER 431
            :|...|||::||||||.::.|...:|:.:.: .|||.....|:..:.::.:|..:|||.|:.|.|
  Rat   380 FLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYNPFR 444

  Fly   432 WMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKATYTFILSS 496
            : |.:...::.|||:||||:||:|||||.||..:||..::..:..:.|||...:.:.....||.:
  Rat   445 F-DPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLLPDDKEPRRQPELILRA 508

  Fly   497 STGNNVGLKP 506
            ..|..:.::|
  Rat   509 EGGLWLRVEP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 p450 35..482 CDD:278495 158/467 (34%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 158/471 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348626
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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