DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp26c1

DIOPT Version :10

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001098671.1 Gene:Cyp26c1 / 546726 MGIID:2679699 Length:518 Species:Mus musculus


Alignment Length:514 Identity:127/514 - (24%)
Similarity:208/514 - (40%) Gaps:94/514 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIPIVGNGLQALTLRPENFIQRFGDYFN-- 65
            :|||:|..:.||.|..|| .| .:|....:  |....|..|..|..|       :|  |..|:  
Mouse    24 LLLGLAQQLWTLRWTLSR-DW-ASTLPLPK--GSMGWPFFGETLHWL-------VQ--GSRFHSS 75

  Fly    66 ---KYGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLGDGLLL-STGNKWTS 126
               :||..|:..:||..:|.....:...:||.....|.::...:.....||...|| :.|.....
Mouse    76 RRERYGTVFKTHLLGRPVIRVSGAENVRTILLGEHRLVRSQWPQSAHILLGSHTLLGAVGEPHRQ 140

  Fly   127 RRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAMGVQV 191
            ||||||..|....||.||   .|..|.:..:::::...:..|.:::........:.....:|:|:
Mouse   141 RRKVLARVFSRSSLEQFV---PRLQGALRREVRSWCAAQRPVAVYQAAKALTFRMAARILLGLQL 202

  Fly   192 NAQNEPNFPYT-KALKSVVYIESKRLASVSMRYNWLFPLAAPLVYRRLQKDIAIMQDFTDKVIRE 255
            :........:| :.|     :|:            ||.|...:.:..|:|.|.......:.:   
Mouse   203 DEARCTELAHTFEQL-----VEN------------LFSLPLDVPFSGLRKGIRARDQLYEHL--- 247

  Fly   256 RRAILERARADGTYKPLIMGDDDIGGKAKMTLLDILLQA-TIDNKPLSDVDIREEVDVFIFAGDD 319
            ..|:.|:.:...|.:|   ||         .||.|:..| .:.::| |..:::|.....:||...
Mouse   248 DEAVAEKLQEKQTAEP---GD---------ALLLIINSARELGHEP-SVQELKELAVELLFAAFF 299

  Fly   320 TTTSGVSHALHAISRHP----KVQE----------CIYEELVSVLGPD----PDASVTQTKLLEL 366
            ||.|..:..:..:.:||    |:|:          |......|...||    ||.|:..  |..|
Mouse   300 TTASASTSLILLLLQHPAAITKIQQELSAQGLGRACTCTPRASGSPPDCGCEPDLSLAM--LGRL 362

  Fly   367 KYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPE-----YFPDPLV 426
            :|:|||:||.:||.|||....|......::....||...|::    |..||..     |...|..
Mouse   363 RYVDCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSVM----YSIRDTHETAAVYRSPPEG 423

  Fly   427 FKPERW----MDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIR--HYEL 479
            |.|||:    .|.:.:...  ..||||..|.::|:||:.|...::.|..:::|  .:||
Mouse   424 FDPERFGVESGDARGSGGR--FHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWEL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 CYP4 68..502 CDD:410721 107/444 (24%)
Cyp26c1NP_001098671.1 cytochrome_P450 59..504 CDD:477761 114/475 (24%)

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