DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp4a1

DIOPT Version :9

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_787031.1 Gene:Cyp4a1 / 50549 RGDID:68945 Length:509 Species:Rattus norvegicus


Alignment Length:504 Identity:153/504 - (30%)
Similarity:257/504 - (50%) Gaps:72/504 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIP----IVGN-------GLQALTLRPENFI 57
            :||:.:|::..|....::||.:..|::      |..|    ..|:       .||.:....|||.
  Rat    24 VLGLLLLLVKAVQFYLQRQWLLKAFQQ------FPSPPFHWFFGHKQFQGDKELQQIMTCVENFP 82

  Fly    58 QRFGDYFNKYGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAH-LYRFLRDFLGDGLLLSTG 121
            ..|..:|  :|....|      ::|..|  |.:.||..|.  .||: :||.|..::|.||||..|
  Rat    83 SAFPRWF--WGSKAYL------IVYDPD--YMKVILGRSD--PKANGVYRLLAPWIGYGLLLLNG 135

  Fly   122 NKWTSRRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETA 186
            ..|...|::|.||||:..|:.:|:.|..:..:|::|.:..|...:.:::|:.:||..||...:.|
  Rat   136 QPWFQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWEQLAGQDSSIEIFQHISLMTLDTVMKCA 200

  Fly   187 MGVQVNAQNEPNF-PYTKALKSVVYIESKRLASVSMR----YNW-----LFPLAAPLVYRRLQKD 241
            .....:.|.:.|: .|.:|:.::..:...|:.::..:    ||:     ||..|..|.:      
  Rat   201 FSHNGSVQVDGNYKSYIQAIGNLNDLFHSRVRNIFHQNDTIYNFSSNGHLFNRACQLAH------ 259

  Fly   242 IAIMQDFTDKVIRERRAILERARADGTYKPLIMGD-DDIGGKAKMTLLDILLQATIDN-KPLSDV 304
                 |.||.||:.|:..|:.|           |: :.:..|.::..|||||.|.::| ..|||.
  Rat   260 -----DHTDGVIKLRKDQLQNA-----------GELEKVKKKRRLDFLDILLLARMENGDSLSDK 308

  Fly   305 DIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELKYL 369
            |:|.|||.|:|.|.|||.||||...:|::.||:.|:...||:.||||  ..:|:|...|.::.|.
  Rat   309 DLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQQRCREEVQSVLG--DGSSITWDHLDQIPYT 371

  Fly   370 DCVIKETMRLHPPVPILGRYIPEDLKIGE-ITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWM 433
            ...|||.:||:||||.:.|.:...:...: .::|....:.|..|.::.:|:.:|:|.||.|.|:.
  Rat   372 TMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFA 436

  Fly   434 -DMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLP 481
             |....|:    :::|||.|.:||||::||..:||.:::..:..:||||
  Rat   437 PDSPRHSH----SFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLP 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 p450 35..482 CDD:278495 146/473 (31%)
Cyp4a1NP_787031.1 p450 52..503 CDD:278495 145/470 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348531
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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