DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp4a3

DIOPT Version :10

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:521 Identity:163/521 - (31%)
Similarity:260/521 - (49%) Gaps:55/521 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIPIVGNGLQALTLRPENFIQRFGDYFNKYG 68
            ||.:.:::...|....|:||.:...||.    |.|   ..:.|....|:...| |:...:..|:.
  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALEKF----PST---PSHWLWGHDLKDREF-QQVLTWVEKFP 80

  Fly    69 KTFRLWILG---ECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFL----GDGLLLSTGNKWTS 126
            .....|:.|   ..|:|..|  |.:.:|..|. .|.:.:|:||..::    |.||||..|.||..
  Rat    81 GACLQWLSGSKTRVLLYDPD--YVKVVLGRSD-PKASGIYQFLAPWIVSGTGYGLLLLNGKKWFQ 142

  Fly   127 RRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAMGVQV 191
            ..::|.||||:..|:.:|:||..:..||::|.:...|....:::|.:|||..||...:.|...|.
  Rat   143 HWRMLTPAFHYGILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQG 207

  Fly   192 NAQNEPNF-PYTKALKSVVYIESKRLASVSMRYNWLFPLAAPLVYRRLQKDIAIMQDFTDKVIRE 255
            :.|.:.|. .||||::.:..:...|:.|.....:.::.:::.  .|..::...|..:.||.||:.
  Rat   208 SVQLDVNSRSYTKAVEDLNNLTFFRVRSAFYGNSIIYNMSSD--GRLSRRACQIAHEHTDGVIKM 270

  Fly   256 RRA------ILERARADGTYKPLIMGDDDIGGKAKMTLLDILLQATI-DNKPLSDVDIREEVDVF 313
            |:|      .|::||.                |..:..|||||.|.: |.|.|||.|:|.|||.|
  Rat   271 RKAQLQNEEELQKARK----------------KRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTF 319

  Fly   314 IFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELKYLDCVIKETMR 378
            :|.|.|||.||:|...:|::.||:.||...||:.|:||  ...|||...|.::.|....|||.:|
  Rat   320 MFEGHDTTASGISWVFYALATHPEHQERCREEVQSILG--DGTSVTWDHLDQISYTTMCIKEALR 382

  Fly   379 LHPPVPILGRYI--PEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWM-DMKTTSN 440
            |:||||.:.|.:  |.....|. :||...:..::.|.::.:|.|:|:|.||.|.|:. |....|:
  Rat   383 LYPPVPSVSRELSSPVTFPDGR-SIPKGITTTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSH 446

  Fly   441 TPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKATYT-FILSSSTGNNVGL 504
                ||:|||.|.:||||::||..::|..::..:..:||||....:..... .:|.|..|.::.|
  Rat   447 ----AYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMARLVLKSKNGIHLRL 507

  Fly   505 K 505
            |
  Rat   508 K 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 CYP4 68..502 CDD:410721 146/452 (32%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 149/465 (32%)

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