DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:556 Identity:186/556 - (33%)
Similarity:291/556 - (52%) Gaps:86/556 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWILLGIAVLIMTLVWDNSRK-------------QWRVNTFEKSRILGPF-----TIPIVGNGLQ 47
            :|:.||::...: |:|..:..             |..|:...|.:.:.|.     ..|:||:   
  Rat     2 LWLWLGLSGQKL-LLWGAASAVSVAGATVLLNILQMLVSYARKWQQMRPIPSVARAYPLVGH--- 62

  Fly    48 ALTLRPEN--FIQRFGDYFNKYG--KTFRLWILGECLIYTKDLKYFESILSSSTLLKKAHLYRFL 108
            ||.::|.|  |.|:...|..::.  ...:|||....|:.....:..|.||:||..:.|:.:|:||
  Rat    63 ALFMKPNNTEFFQQIIQYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFMYKFL 127

  Fly   109 RDFLGDGLLLSTGNKWTSRRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKF 173
            :.:||.|||.|||:||.:|||:|.|:|||..||:|:::|:..:.|:|.||:.:.: :...:.|..
  Rat   128 QPWLGLGLLTSTGSKWRARRKMLTPSFHFTILEDFLDVMNEQANILVNKLEKHVN-QEAFNCFFP 191

  Fly   174 VSLEALDVTTETAMGVQVNAQNEPNFPYTKA---LKSVVYIESKRLASVSMRYNWLFPLAAPLVY 235
            ::|.|||:..|||||..:.||:..:..|.:.   :..::|...|      |.:.|.     .|.|
  Rat   192 ITLCALDIICETAMGKNIGAQSNGDSEYVRTVYRMSDMIYRRMK------MPWFWF-----DLWY 245

  Fly   236 ------RRLQKDIAIMQDFTDKVIRERRAILERARADGTYKPLIMGDDDIG-GKA-------KMT 286
                  |..:|.:..:..||:.||.||   :...:|:         .|.|| |:.       :..
  Rat   246 LMFKEGRDHKKGLKSLHTFTNNVIAER---VNARKAE---------QDCIGAGRGPLPSKTKRKA 298

  Fly   287 LLDILLQATID--NKPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSV 349
            .||:||..|.:  || ||..|||||||.|:|.|.|||.:.::.:|:.:..:|:||..:.:||..|
  Rat   299 FLDLLLSVTDEEGNK-LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDV 362

  Fly   350 LGPDPDASVTQTKLLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYV 414
            .|.. ...||...|.:|||||||||||:|:.|.||:..|.:.||.::....|...|..:::||.:
  Rat   363 FGRS-HRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYAL 426

  Fly   415 YRDPEYFPDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHY-- 477
            :|||.|||||..|:|||:.. :.:....|.||:|||:||:||||||||.::.|.:::.::|.:  
  Rat   427 HRDPRYFPDPEEFQPERFFP-ENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWI 490

  Fly   478 ------ELLPLGADLKATYTFILSSSTGNNVGLKPR 507
                  |.|.|..||      ||..:.|..:.||.|
  Rat   491 ESNQKREELGLAGDL------ILRPNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 CYP4 68..502 CDD:410721 164/462 (35%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 165/471 (35%)

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