DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d21 and Cyp4a2

DIOPT Version :10

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001038235.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:504 Species:Rattus norvegicus


Alignment Length:517 Identity:161/517 - (31%)
Similarity:256/517 - (49%) Gaps:54/517 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIPIVGNGLQALTLRPENFIQRFGDYFNKYG 68
            ||.:.:::...|....|:||.:...||.    |.|   ..:.|....|:...| |:...:..|:.
  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALEKF----PST---PSHWLWGHNLKDREF-QQVLTWVEKFP 80

  Fly    69 KTFRLWILG---ECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLGDGLLLSTGNKWTSRRKV 130
            .....|:.|   ..|:|..|  |.:.:|..|    ....|:.|..::|.||||..|.||...|::
  Rat    81 GACLQWLSGSTARVLLYDPD--YVKVVLGRS----DPKPYQSLAPWIGYGLLLLNGKKWFQHRRM 139

  Fly   131 LAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAMGVQVNAQN 195
            |.||||:..|:.:|:||..:..||::|.:...|....:::|.:|||..||...:.|...|.:.|.
  Rat   140 LTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQL 204

  Fly   196 EPNF-PYTKALKSVVYIESKRLASVSMRYNWLFPLAAPLVYRRLQKDIAIMQDFTDKVIRERRA- 258
            :.|. .||||::.:..:...|:.|.....:.::.:::.  .|..::...|..:.||.||:.|:| 
  Rat   205 DVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSD--GRLSRRACQIAHEHTDGVIKTRKAQ 267

  Fly   259 -----ILERARADGTYKPLIMGDDDIGGKAKMTLLDILLQATI-DNKPLSDVDIREEVDVFIFAG 317
                 .|::||.                |..:..|||||.|.: |.|.|||.|:|.|||.|:|.|
  Rat   268 LQNEEELQKARK----------------KRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEG 316

  Fly   318 DDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELKYLDCVIKETMRLHPP 382
            .|||.||:|...:|::.||:.||...||:.|:||  ...|||...|.::.|....|||.:||:.|
  Rat   317 HDTTASGISWVFYALATHPEHQERCREEVQSILG--DGTSVTWDHLDQMPYTTMCIKEALRLYSP 379

  Fly   383 VPILGRYI--PEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWM-DMKTTSNTPPL 444
            ||.:.|.:  |.....|. :||....:.::.|.::.:|.|:|:|.||.|.|:. |....|:    
  Rat   380 VPSVSRELSSPVTFPDGR-SIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSH---- 439

  Fly   445 AYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKATY-TFILSSSTGNNVGLK 505
            ||:|||.|.:||||::||..::|..::..:..:||||....:.... ..:|.|..|.::.||
  Rat   440 AYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 CYP4 68..502 CDD:410721 144/448 (32%)
Cyp4a2NP_001038235.1 CYP4B-like 69..499 CDD:410771 147/461 (32%)

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