DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d21 and Cyp4a12b

DIOPT Version :9

Sequence 1:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus


Alignment Length:537 Identity:149/537 - (27%)
Similarity:256/537 - (47%) Gaps:90/537 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIP----------IVGNGLQALTLRPENFIQ 58
            :|.:.:|:.........:||.:::.::      |..|          :....||.:..|.:||..
Mouse    24 VLSLLLLLFKTAQLYLHRQWLLSSTQQ------FPSPPSHWLFGHKILKDQDLQDILTRIKNFPS 82

  Fly    59 RFGDYFNKYGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAH-LYRFLRDFLGDGLLLSTGN 122
            ....:.  :|...|:      .:|..|  |.:.||..|.  .||| .||||..::|.||||..|.
Mouse    83 ACPQWL--WGSKVRI------QVYDPD--YMKLILGRSD--PKAHGSYRFLAPWIGRGLLLLDGQ 135

  Fly   123 KWTSRRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAM 187
            .|...|::|.||||:..|:.:.|||..:..:|::|.:......:.:::|:.::|..||...:.|.
Mouse   136 TWFQHRRMLTPAFHYDILKPYTEIMADSVHVMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAF 200

  Fly   188 GVQVNAQNEPNF-PYTKALKSVVYIESKRLASVSMRYNWLFPLAAPLVYRRLQKDI--------- 242
            ..:.:.|.:..: .|.:|::.:               |.||.|....::.  |.||         
Mouse   201 SHEGSVQLDRKYKSYIQAVEDL---------------NNLFFLRVRNIFH--QNDIIYRVSSNGC 248

  Fly   243 ------AIMQDFTDKVIRERRAILERARADGTYKPLIMGDDD----IGGKAKMTLLDILLQATID 297
                  .:..|.||:||:.||:.|:              |::    :..|.::..|||||.|.::
Mouse   249 LANSACQLAHDHTDQVIKSRRSQLQ--------------DEEELEKLKKKRRLDFLDILLFARME 299

  Fly   298 N-KPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQT 361
            | |.|||.|:|.|||.|:|.|.|||.||:|...:|::.:|:.|:...:|:.|:||  ..||:|..
Mouse   300 NGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLG--DGASITWN 362

  Fly   362 KLLELKYLDCVIKETMRLHPPVPILGRYI--PEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDP 424
            .|.::.|....|||.:|::||||.:.|.:  |.....|. ::|....::|..|.::.:|..:|:|
Mouse   363 DLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGR-SLPKGIHVMLSFYGLHHNPTVWPNP 426

  Fly   425 LVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKAT 489
            .||.|.|:   ...|:....:::|||.|.:||||::||..::|..::..:..:||||....:...
Mouse   427 EVFDPSRF---APGSSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRVPIP 488

  Fly   490 Y-TFILSSSTGNNVGLK 505
            . ..:|.|..|.::.||
Mouse   489 IPRIVLKSKNGIHLHLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d21NP_609129.2 p450 35..482 CDD:278495 139/480 (29%)
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 141/481 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845024
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.