DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and AT1G63280

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_176517.1 Gene:AT1G63280 / 842634 AraportID:AT1G63280 Length:120 Species:Arabidopsis thaliana


Alignment Length:110 Identity:31/110 - (28%)
Similarity:46/110 - (41%) Gaps:14/110 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKA 183
            |..||..:|.:        :|.|..:.|.|:|.:::......|:|.....||:||||.|...|..
plant     5 FVLKAVQVRQE--------LNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDK 61

  Fly   184 DQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDA-KIIELPY 227
            ..|...:|:......:|     ...|..|.||...|. |::.|||
plant    62 SSTKDNEFHQGKEVHVP-----FMRSYESQYIMACDGFKVLGLPY 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 31/110 (28%)
AT1G63280NP_176517.1 serpin <5..>120 CDD:422956 31/110 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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