DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and SERPIN1

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001320925.1 Gene:SERPIN1 / 841182 AraportID:AT1G47710 Length:418 Species:Arabidopsis thaliana


Alignment Length:381 Identity:113/381 - (29%)
Similarity:182/381 - (47%) Gaps:48/381 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRS-----LLSD--- 83
            |||:  |:|:||.|..:::|::...|.|.|.:::.:.||||....|  |::.|     :|:|   
plant    53 SQNS--NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQL--NSFSSEIVSAVLADGSA 113

  Fly    84 ---LKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD-PVSASAIVNSWILN 144
               .|       |.:||..:::|.....|.|.||...::||.:....... .|...|.||||...
plant   114 NGGPK-------LSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEK 171

  Fly   145 RTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSAS 209
            .|.|:|..::.....:|.|.....||:||||.|...|....|...:|::.....:....||   |
plant   172 ETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMT---S 233

  Fly   210 LLSGYIDDIDA-KIIELPYWNS----TLSMRIILPNSVDGLRKLKEKV----GFIDYHLEKKSVN 265
            ....|:...|. |::.|||...    ..||...||::.:||..|.:|:    ||:|.|:.::.|.
plant   234 KKKQYVSAYDGFKVLGLPYLQGQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVK 298

  Fly   266 V---KLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLV--LESGAK--IDKIVQKAFLKIDEK 323
            |   |:||||.........:.:.||:...|.....|..:|  .|.|..  :..|..||.::::|:
plant   299 VREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVNEE 363

  Fly   324 GGEASAAT-GVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDN--KVIYFQGHIVEP 376
            |.||:||: ||:..|...::   :..::|:|||||..|:.:|  .|:.|.|.:|:|
plant   364 GTEAAAASAGVIKLRGLLME---EDEIDFVADHPFLLVVTENITGVVLFIGQVVDP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 112/379 (30%)
SERPIN1NP_001320925.1 serpinP_plants 35..416 CDD:381001 112/379 (30%)

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