DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and AT3G45220

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_190108.1 Gene:AT3G45220 / 823658 AraportID:AT3G45220 Length:393 Species:Arabidopsis thaliana


Alignment Length:374 Identity:100/374 - (26%)
Similarity:173/374 - (46%) Gaps:43/374 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSEN---KTLVANNYRSLLSDLKRRETFIILH 94
            ||::||:|..:::.::...|...|.|::.:.:....:   ..::|......|:|...|..   ||
plant    30 NLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALNDGMERSD---LH 91

  Fly    95 M--ANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRL-DDPVSASAIVNSWILNRTRGMIRNIVLP 156
            :  |..::::|.....|.|..|...::.|....:.. ..|......||:|....|.|:|:.|:..
plant    92 LSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIKEILSD 156

  Fly   157 KDFNS--DTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDID 219
            ....:  ::...|.||:||||.|...|.|..|...||::....::.|..||   :....|::..|
plant   157 DSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMT---NYKKQYLEYYD 218

  Fly   220 A-KIIELPYWNS--TLSMRIILPNSVDGLRKLKEKVG----FIDYHLEKKSV---NVKLPKFKIE 274
            . |::.|||...  ..:|.|.|||..|||..|.|::.    |:|.|:.::.:   ..|:||||..
plant   219 GFKVLRLPYVEDQRQFAMYIYLPNDRDGLPTLLEEISSKPRFLDNHIPRQRILTEAFKIPKFKFS 283

  Fly   275 SKAQLKGIFENLGILDVF----------KPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASA 329
            .:.:...:.:.:|:...|          .||...|..|.|: ..:..:..||.:::||:|.|| |
plant   284 FEFKASDVLKEMGLTLPFTHGSLTEMVESPSIPENLCVAEN-LFVSNVFHKACIEVDEEGTEA-A 346

  Fly   330 ATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK--VIYFQGHIVEP 376
            |..|.:..|   |.|:..  :|:|||||.:.:.:.|  ||.|.|.:::|
plant   347 AVSVASMTK---DMLLMG--DFVADHPFLFTVREEKSGVILFMGQVLDP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 99/372 (27%)
AT3G45220NP_190108.1 serpinP_plants 8..390 CDD:381001 99/372 (27%)

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