DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and zgc:174259

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_021331992.1 Gene:zgc:174259 / 791587 ZFINID:ZDB-GENE-080213-10 Length:410 Species:Danio rerio


Alignment Length:370 Identity:97/370 - (26%)
Similarity:177/370 - (47%) Gaps:25/370 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FYRILASQN-AKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSE---NKTLVANNYRSLL 81
            :.|::.|.: ..:|:.:||.|..:.:|.:.:.:||.|.::|.:.:.:|.   :...:...:.|||
Zfish    48 YKRLIESPDYQSKNIFFSPFSVSMALSELSLGAGGDTKQQLLSGIGYSSAIFSTEEMHQLFHSLL 112

  Fly    82 SDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRT 146
            .|:..| |.:.:.:...:|.:.::....:|.:..::.:.:...::......:...| |.::..:|
Zfish   113 EDIGNR-TGVDIDVGTALYASDRFKPHSKFLEDMKEFYHSDGFTVDFSVKETVDQI-NKYVEEKT 175

  Fly   147 RGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLL 211
            .|.|...|  .|.::||...|:..|||||:|...|....|..:.|::.....:||:||.....|.
Zfish   176 HGKINQAV--DDLDADTFMVLLTYIYFKGKWDKPFNPKTTSESTFHIDDKTTVPVQMMHQYERLK 238

  Fly   212 SGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKE-KVGFIDYHLEK-------KSVNVKL 268
            ..|..::..|::.|.| |.:.||.:.:|:...|.:.:|: ::.....|:||       :.|::.:
Zfish   239 VYYDAELSTKVLCLDY-NDSFSMFLAVPDVHMGRKTIKDLEMTVSRQHVEKWRRSVSERKVDIYV 302

  Fly   269 PKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGV 333
            ||..:::...||.|.:.:|:.|:|...||..| |.|....:.|::.||.|.|||||..|:|.|.|
Zfish   303 PKLSLKTSYSLKDILKGMGMADMFSDKADFTG-VSEEKIYVSKVLHKATLDIDEKGTTAAAVTTV 366

  Fly   334 LTRRKKSIDNLIQPPMEFIADHPFFYVIHD--NKVIYFQGHIVEP 376
            ..|...     ..|..:...|.||...|.|  |..|.|.|.:|.|
Zfish   367 HLRFMS-----YSPMSDLSFDRPFMIFITDQTNDNILFVGKVVNP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 95/365 (26%)
zgc:174259XP_021331992.1 alpha-1-antitrypsin_like 39..403 CDD:239011 95/365 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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