DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpina3a

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:385 Identity:96/385 - (24%)
Similarity:185/385 - (48%) Gaps:36/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVAN- 75
            |:.:.|....|:.||.:|..:|:::||:|....::::.:.:...|.||:...|||:..:|..|: 
Mouse    51 SINTDFAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEADI 115

  Fly    76 --NYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIV 138
              |:..||..|.:.|..:.::..|.::::|...::.||.:.||..:||:|.:.....|..|:.::
Mouse   116 HQNFGHLLQMLIQPENQVQINAGNALFIDKHLQILTEFKEKARALYKAEAFTADFQLPREATKLI 180

  Fly   139 NSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKM 203
            |.::..:|:|.|:.:|  .|.:.:||..|||.:.|:|.|...|..:.|.:.:|.:.....:.|.|
Mouse   181 NDYVRKQTQGKIKELV--SDLHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNFTLDRKRTVNVPM 243

  Fly   204 MTLSASLLSGYI--DDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYHLEKKSV-- 264
            |. :..|.:.|.  :::.:.::||.|..:. |...|||:        :.::..::..|:.:|:  
Mouse   244 MK-TEELTTNYFRDEEMQSTVMELNYIGNA-SFLFILPD--------QGRIQHVEDSLQPQSLRK 298

  Fly   265 -----------NVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFL 318
                       .:.||||.:.....|..|...|||.:||...|||:|:......::.:::.:|.|
Mouse   299 WRKSLRPRMLDELSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSGITGAKNIRVSQMIHQAAL 363

  Fly   319 KIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDN--KVIYFQGHIVEP 376
            .:.|...||.    |:|..:.:..:..........|..|.|:|.|.  |.|...|.::.|
Mouse   364 DVTETHTEAD----VITIARYNFQSAKIKAKIVKVDREFLYLILDPMFKSISVMGKVINP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 94/375 (25%)
Serpina3aNP_001161177.1 SERPIN 53..416 CDD:294093 94/378 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.100

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