DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpini2

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_080736.2 Gene:Serpini2 / 67931 MGIID:1915181 Length:405 Species:Mus musculus


Alignment Length:400 Identity:111/400 - (27%)
Similarity:201/400 - (50%) Gaps:44/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YLLLLATSVES--------GFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELR 61
            :||..:.|..|        .|..|.|:.: |.:.|.|:|:||:...:::.||.:.:.||..:::.
Mouse     9 FLLFFSGSQTSRATDQKIADFAVDLYKAI-SLSHKNNIIFSPLGTTMLLGMVQLGAKGKAQQQIL 72

  Fly    62 NVLK---------FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARK 117
            ..|:         ||..|:|.     |.:|..|:..||   ::|:.:|:.:.:.:...:....::
Mouse    73 KTLRMRGTPAGEEFSVLKSLF-----SAISKKKQEFTF---NLASALYLQEGFIVKETYLHSNKE 129

  Fly   118 AFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFK 182
            .|::..|.:...|..:::..:::|:.::|.|.|:|:...::|...|...|||||||||.|...|:
Mouse   130 FFQSATKLVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYFKGDWKQKFR 194

  Fly   183 ADQTHIADFYVSANEIIPVKMMTLSASLLSGYI--DDIDAKIIELPYWNSTLSMRIILPNSVDGL 245
            .:.|.:.||.......:.|.||........||.  ..:..:::||||.....|:.||||.....:
Mouse   195 KEDTEMTDFTKKDGSTVKVPMMKALLRAQYGYFSQSSMTCQVLELPYKADEFSLVIILPTEDTSI 259

  Fly   246 RKLKEKV-------GFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVL 303
            .:::.:|       .|.:.|.|:  |.|.||:||||.|..||....:|.:.::|....||:|:..
Mouse   260 EEVENQVTAPHVRRWFSELHEEE--VEVSLPRFKIEQKLDLKEALYSLNVTEIFSGGCDLSGITD 322

  Fly   304 ESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHD--NKV 366
            .|...:.:::||.|.:|:|.|.||:|:||:   ...:|.:|.|  .:|:|:|||.:::..  .:.
Mouse   323 SSEVYVSRVMQKVFFEINEDGSEAAASTGI---NIPAIMSLTQ--TQFLANHPFLFILKHIRTES 382

  Fly   367 IYFQGHIVEP 376
            |.|.|.:.:|
Mouse   383 ILFMGKVTDP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 106/375 (28%)
Serpini2NP_080736.2 neuroserpin 23..405 CDD:239003 106/385 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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