DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb2

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:405 Identity:109/405 - (26%)
Similarity:193/405 - (47%) Gaps:60/405 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFS------------EN-------K 70
            :...|:.:|:..||.|....:::|::.:...|.|::..||.|.            ||       :
  Rat    19 IEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSYDLTPGNPENFHGCDFAQ 83

  Fly    71 TLVANNYRSLLSDLKRRETF------------------IILHMANRIYVNKKYCLVPEFNQLARK 117
            .:..:||...:...:.|:..                  .:|..||:::..|......|:.|..:|
  Rat    84 HIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDYLLESANKLFGEKSARFKEEYIQRCKK 148

  Fly   118 AFKAKAKSIR-LDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNF 181
            .:..:.:::. |:....|...:|||:..:|:|.|.|::.....:.||...|||.|||||:|...|
  Rat   149 YYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNTIYFKGRWKTPF 213

  Fly   182 KADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVD--- 243
            :.....:..|.|:.||..||:||.|...|..|||.|:..:|:||||..: :||.::||:.::   
  Rat   214 QKRLNGLYPFRVNLNESKPVQMMYLREKLNIGYIKDLKTQILELPYIGN-ISMFLLLPDEIEDSS 277

  Fly   244 -GLRKLKEKVGFIDYH-------LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVF-KPSADLN 299
             ||..|:.::.|.:::       |::..|.|.:||||:....:||.|.:.:|:.|.| |..||.:
  Rat   278 TGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNYELKPILQRMGMEDAFNKGKADFS 342

  Fly   300 GLVLESGAKIDKIVQKAFLKIDEKGGEASAATG-VLTRRKKSIDNLIQPPMEFIADHPFFYVIHD 363
            |:...:...:.::..:|.:.::|:|..|:..|| |:|.|..      ....:|:|||||.:.|.:
  Rat   343 GMSESNDLFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRTG------HGGPQFVADHPFLFFIMN 401

  Fly   364 N--KVIYFQGHIVEP 376
            |  :.|.|.|....|
  Rat   402 NITRTILFVGRFSSP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 108/400 (27%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 108/403 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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