DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and zgc:113828

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001025278.2 Gene:zgc:113828 / 556938 ZFINID:ZDB-GENE-050913-23 Length:409 Species:Danio rerio


Alignment Length:374 Identity:97/374 - (25%)
Similarity:180/374 - (48%) Gaps:34/374 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FYRILASQN-AKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANN-----YRS 79
            :.|::.|.: ..:|:.:||.|..:.:|.:.:.:||.|.::|.:.:.:  |.|:.:..     :.|
Zfish    48 YKRLIESPDYQSKNIFFSPFSVSMALSELSLGAGGDTKQQLLSGIGY--NSTIFSTEEMHQLFHS 110

  Fly    80 LLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSI--RLDDPVSASAIVNSWI 142
            ||.|:..| |.:.:.:...:|.:.::....:|.:..::.:.:...::  |:.:.|..   :|.::
Zfish   111 LLEDIGNR-TGVDIDVGTALYASDRFKPHSKFLEDMKEFYHSDGFTVDFRVKETVDQ---INKYV 171

  Fly   143 LNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLS 207
            ..:|.|.|...|  .|...||...|:..|||||:|...|..:.|..:.|::.....:||:||...
Zfish   172 EEKTHGKINQAV--DDLEEDTFMLLLTYIYFKGKWDKPFNPETTSESTFHIDDKTTVPVQMMHQY 234

  Fly   208 ASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKE-KVGFIDYHLEK-------KSV 264
            ......|..::..|::.|.|  .:.||.:.:|:...|.:.:|: ::.....|:||       :.|
Zfish   235 ERFKVYYDAELSTKVLCLNY--DSFSMFLAVPDVHMGRKTIKDLEMTVSRQHIEKWRRSVSERKV 297

  Fly   265 NVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASA 329
            ::.:||..:::...||.|.:.:|:.|:|...||..| |.|....:.|::.||.|.|||||..|:|
Zfish   298 DIYVPKLSLKTSYSLKDILKGMGMADMFSDKADFTG-VSEEKIFVSKVLHKATLDIDEKGTTAAA 361

  Fly   330 ATGVLTRRKKSIDNLIQPPMEFIADHPF--FYVIHDNKVIYFQGHIVEP 376
            .|.|..    |:.: ..|..:...|.||  |...|.|..|.|.|.:|.|
Zfish   362 VTTVYA----SVMS-YSPMSDLRFDRPFMIFITDHTNDNILFFGKVVNP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 96/372 (26%)
zgc:113828NP_001025278.2 serpin 40..407 CDD:476815 97/374 (26%)

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