DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and serpini2

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001015754.1 Gene:serpini2 / 548471 XenbaseID:XB-GENE-980167 Length:410 Species:Xenopus tropicalis


Alignment Length:413 Identity:116/413 - (28%)
Similarity:197/413 - (47%) Gaps:53/413 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLYLLLLATSVESGFW-----------------EDFYRILASQNAKRNLIYSPISAEIIMSMV 48
            ||.||..::......|.|                 .|..|.:.|...:.|:|:||:...:|:.|:
 Frog     1 MKRLYPGVIVAVTLCGVWITCNASRLWGDAITELAVDLSRAIHSSCTEENIIFSPLGTSLILGMI 65

  Fly    49 YMASGGKTFEELRNVLK---------FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKK 104
            .:.:.|....:::..||         |||.|||:|     ::|:..:..||   ::||.:|:.:.
 Frog    66 KLGARGAALSQIQQALKLQGNQDSEEFSELKTLLA-----VISEENKEFTF---NLANALYLQEG 122

  Fly   105 YCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVN 169
            :.:..::....|..|.:..|.:...|..:::..::.|:..:|.|.|..:....||...|...|||
 Frog   123 FQVKEQYLHSNRDVFNSAIKLVDFQDVKASAETISEWVQRQTHGKISKMFSSGDFTPLTKMVLVN 187

  Fly   170 AIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGY--IDDIDAKIIELPYWNSTL 232
            |:||||:|...|..:.||..:|.|.....:.|.||.|..:...||  :.:...|::||||.....
 Frog   188 ALYFKGEWKQKFSVEATHSEEFSVKRGLTVKVPMMHLQTTTKLGYFSVKNASYKVLELPYKGDKF 252

  Fly   233 SMRIILPNSVDGLRKLKE-------KVGFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILD 290
            |:.:.||.....:.:|::       |..|.|  ::::.|.:.||:||:|.|..||..|.||.|.|
 Frog   253 SLLLTLPAEDVEIGELEKIVTATMIKTWFAD--MKEEVVEISLPRFKVEHKIDLKKSFLNLNITD 315

  Fly   291 VFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADH 355
            :|....||:|:.......|.|:.||.||:|:|:|.||:|:||:      .:..:......|.|:.
 Frog   316 IFNEGCDLSGITESPNLYISKVFQKVFLEINEEGSEAAASTGM------QVSAMSMSSHRFAANR 374

  Fly   356 PF-FYVIH-DNKVIYFQGHIVEP 376
            || |::.| .:.:|.|.|.::.|
 Frog   375 PFLFFIRHIQSGMILFMGKVMNP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 110/392 (28%)
serpini2NP_001015754.1 serpin 28..397 CDD:393296 109/384 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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