DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and serpind1

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:386 Identity:95/386 - (24%)
Similarity:184/386 - (47%) Gaps:41/386 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VESGFWEDFYRILASQ-NAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKF-------SEN 69
            :.:.|..:.||.:.:. :|..|::.:|:.....|:.:.:.:.|:..:::...|.|       |:.
 Frog   115 INANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFINASSKY 179

  Fly    70 KTLVANN-YRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVS 133
            :.|..:| :|.|...|.||.....|...|.|||.|.:.:...|....:..:.|:|:.:   |..|
 Frog   180 EILTLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMV---DFGS 241

  Fly   134 ASAI--VNSWILNRTRGMIRNIVLPKDFNSDTS--AFLVNAIYFKGQWLYNFKADQTHIADFYVS 194
            ...:  .|..|...|:|:|:..:.    |.|.:  ..|||.|||||.|...|..:.|...:|.::
 Frog   242 KDFLTKANKRIQQLTKGLIKEALT----NVDPALLMLLVNCIYFKGTWENKFPVEYTQNMNFRLN 302

  Fly   195 ANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVG--FIDY 257
            ..|::.|.||....:.|.....::|..:::|||..: :||.|:||:.:.|::.|::::.  .::.
 Frog   303 EKELVKVPMMKTKGNFLVAADPELDCAVLQLPYVGN-ISMLIVLPHKLSGMKLLEKQISPQVVER 366

  Fly   258 H---LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLK 319
            .   :..::..|.||:||:|....|:.:..|:|:.|:| ...|.:| |.:....|.....:..:.
 Frog   367 WQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLF-THGDFSG-VSDKNMNIGLFQHQGTIT 429

  Fly   320 IDEKGGEASAAT--GVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKV--IYFQGHIVEP 376
            ::|:|.||:|.|  |.:.         :.....|:||.||.::|::::.  :.|.|.:..|
 Frog   430 VNEEGTEAAAVTVVGFMP---------LSTQARFVADRPFLFLIYEHRTNCLIFMGRVANP 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 94/384 (24%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 95/386 (25%)

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