DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn42Dd

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:379 Identity:164/379 - (43%)
Similarity:235/379 - (62%) Gaps:10/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLYLLLLATSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLK 65
            |.||.:.|..|||.....::.|::|:..:..:||:.||:|.|.|:|||:|.:.|.|.:||::.|.
  Fly     1 MYYLCIFLWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALG 65

  Fly    66 F-SENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRL- 128
            . ||:|..||..|.:||:||:.:|...||.:|||||||.:|.|...:|...|:.||::|:||.| 
  Fly    66 LPSEDKEAVAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLT 130

  Fly   129 DDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYV 193
            :.||:|..| |.|:|::|.|.|:.::.|....||..|.|||||||||||...|...:|..:.|.|
  Fly   131 NGPVAAERI-NQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQV 194

  Fly   194 SANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYH 258
            :||:.:||:||....:..:.|..|:||::|||||.||.|||.|.||..|:||..|:||:......
  Fly   195 TANKSVPVQMMAQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFARP 259

  Fly   259 LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLE-SGAKIDKIVQKAFLKIDE 322
            |..|.|.:||||||||.:.:||...|.|||.::|...:||:||..: ||.|:.::..||||:::|
  Fly   260 LVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNE 324

  Fly   323 KGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVEP 376
            :|.||:.||.|....:......:      :|||||.:||.|...|||||.:|.|
  Fly   325 EGAEAAGATSVAVTNRAGFSTFL------MADHPFAFVIRDANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 155/358 (43%)
Spn42DdNP_001163067.1 SERPIN 16..369 CDD:238101 155/359 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468695
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
1110.900

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