DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn88Ea

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster


Alignment Length:405 Identity:113/405 - (27%)
Similarity:185/405 - (45%) Gaps:62/405 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNV--LKFSENKTLVANN 76
            :..|......::.......|:.:||.|....:.:.|..|.|.|.:||..|  |.::::|.:|.:.
  Fly    40 QQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSA 104

  Fly    77 YRSLLSDLKRRETF----IILHMANRI-YVNKKYCLVPEFNQLARKA----FKAKAKSIRLDDPV 132
            |  :|..:.|:|..    :....|:|| :.|..:......|:||.:.    ||::.:..|..   
  Fly   105 Y--ILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQTEESRKQ--- 164

  Fly   133 SASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANE 197
                 :|.||..:|...|||::...:....|...|.||.|.|||||..||.::|....||.|.:.
  Fly   165 -----INDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSN 224

  Fly   198 IIPVKMMTLSASLLSGYIDDIDAKIIELPY---------------WNSTLSMRIILP----NSV- 242
            ...|.||....:.|....:.:.|.:::|||               .||.:||.:|||    ||: 
  Fly   225 YSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLE 289

  Fly   243 DGLRKLKEKVGFIDYHLEK---KSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSA----DLNG 300
            |.|.:|  ....:|..|::   :.:.|.||||:.|.:.:|..|...:|:..:|..|.    ||..
  Fly   290 DVLSRL--NADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTS 352

  Fly   301 LVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLT-RRKKSIDNLIQPPMEFIADHPFFYVIHD- 363
            ..:..|.  .|.|.|  :|:||:|..|:|||.:.| |..:.::     |.:|..:|||.:||:| 
  Fly   353 ETISIGD--SKHVAK--IKVDEEGSTAAAATVLFTYRSARPVE-----PAKFECNHPFLFVIYDR 408

  Fly   364 -NKVIYFQGHIVEPR 377
             ::.|.|.|...:|:
  Fly   409 TSRSILFTGIYRDPK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 112/402 (28%)
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 112/402 (28%)

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