DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and serpinb1

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001011419.1 Gene:serpinb1 / 496899 XenbaseID:XB-GENE-1217264 Length:377 Species:Xenopus tropicalis


Alignment Length:379 Identity:121/379 - (31%)
Similarity:208/379 - (54%) Gaps:37/379 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLLSDL 84
            |.:|.:...||..|:.:||||....::||.:.:.|.|.:::..:|.|...|.| .:|:::|.:::
 Frog    14 DLFRKINENNATGNVFFSPISISTALAMVLLGARGNTAQQISRILHFDAVKDL-HSNFQTLNAEI 77

  Fly    85 -KRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSAS----AIVNSWILN 144
             |:..:...|::|||::..|.:..:|:|....:|.:.|...::   |.:||:    ..:|:|:..
 Frog    78 NKKNVSSYALNLANRLFGEKSFKFLPDFLSSVKKQYNADLGTV---DFISAAEDARKEINTWVSE 139

  Fly   145 RTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSAS 209
            :|:|.|..::.....||.|...|||||||||.|...|||:.|....|.::..|...||||.....
 Frog   140 QTKGKIPEVLSAGAVNSFTKLVLVNAIYFKGDWAKKFKAEHTKDMPFQLNKKEQKTVKMMYQMEK 204

  Fly   210 LLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVD----GLRKLK-----EKVGFIDYHLEKKSVN 265
            |...||.:|:.:::||||.:..|||.|:||::::    ||::|:     ||:.....::....|:
 Frog   205 LPFNYIPEINCRVLELPYVDYELSMVIVLPDNINDDTTGLQQLEKELSLEKINEWTENMMPIDVH 269

  Fly   266 VKLPKFKIESKAQLKGIFENLGILDVFKP-SADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASA 329
            |.|||||:|...:||.....:|:.|:|:. ||||:|:...:...:.:::.|:|::::|:|.||:|
 Frog   270 VHLPKFKLEDSYKLKSQLAGMGMADLFEAGSADLSGMSGSNDLYLSEVIHKSFVEVNEEGTEAAA 334

  Fly   330 AT-GV----LTRRKKSIDNLIQPPMEFIADHPFFYVIHDN--KVIYFQGHIVEP 376
            |: |:    |.|.:           ||.|:|||.:.|..|  |.|.|.|....|
 Frog   335 ASAGIAMMCLMREE-----------EFNANHPFLFFIRHNATKSILFFGRYSSP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 120/374 (32%)
serpinb1NP_001011419.1 SERPIN 4..377 CDD:294093 120/377 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.030

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