DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and serpina3

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:393 Identity:106/393 - (26%)
Similarity:187/393 - (47%) Gaps:51/393 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVESGFWEDFYRILAS------QNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENK 70
            |....|..:.|:.|.:      ::.::|:::||:|.....||:.:.:..::.:::.:.|  |.|:
 Frog    42 SANIDFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSGL--SLNQ 104

  Fly    71 TLVANN-----YRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD 130
            |.|...     :..||..|.|.::.:.:.:.|.::|.....::..|.|.....:.|:.......:
 Frog   105 TQVPEEDMHEAFEHLLQVLNRPKSDLQVKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFKN 169

  Fly   131 PVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSA 195
            |..|...:|.::.|:|.|.|:.:|  ||.:..|...::|.|.|..:|...|.:..||...|.|..
 Frog   170 PAEAEKQINDFVNNKTEGRIQELV--KDLSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDE 232

  Fly   196 NEIIPVKMMTLSASLLSGYIDD-IDAKIIELPYWNSTLSMRIILPN-----------SVDGLRKL 248
            |..:.|:||: ...|...|.|: |...:::|||.|:. ||.||:|.           ||:.|::.
 Frog   233 NTTVEVQMMS-KTDLYQFYKDEKIPCSVLQLPYKNNA-SMLIIVPELGKIHEVEEALSVETLKRW 295

  Fly   249 KEKVGFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIV 313
            ....       ||....:.||||.|.|..:||.|..::|:..:|..:||.:|:...|..|:.|:|
 Frog   296 TSSA-------EKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFSGISENSRLKLSKVV 353

  Fly   314 QKAFLKIDEKGGEASAAT---GVLTRRKKSIDNLIQPPMEFIADHPFFYVI--HDNKVIYFQGHI 373
            .||.|.:.|.|.||:||:   ||||       :|:   ::|:.|.||..:|  .:...|.|...:
 Frog   354 HKAVLNVAENGTEAAAASAVEGVLT-------SLM---VQFVVDKPFITLICSQEPYSILFMSRV 408

  Fly   374 VEP 376
            ::|
 Frog   409 IDP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 105/391 (27%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 104/390 (27%)

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