DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and nec

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:367 Identity:115/367 - (31%)
Similarity:203/367 - (55%) Gaps:17/367 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLLSD 83
            |.|..|:.|| :::|:::||.|...:::::|.||.||||.||:...:||:|...||.::.|::..
  Fly   113 ELFKEIIKSQ-SQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKY 176

  Fly    84 LKRRETFIILHMANRIYVNKKYCLV-PEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTR 147
            .|..|. ..|.:|.::|.|::...| ..:::.|:..|.|..:::.:.:....:|.:|:|:::.||
  Fly   177 KKHLEG-ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMDTTR 240

  Fly   148 GMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLS 212
            ..||::|.|.|.:..|.|.||||:||:|:|.:.|....|...||..:...|..|.||........
  Fly   241 NKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFNDDVYGL 305

  Fly   213 GYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEK-------VGFIDYHLEKKSVNVKLPK 270
            ..:.::.|..:||.|.:|..||.|:|||...||.|:.::       :..:.:.|.::||.|:|||
  Fly   306 AELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQSVAVRLPK 370

  Fly   271 FKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLT 335
            |:.|.:..:....:|||:..:|.|::.:..| ::...::.||:|||::.:.|.|.|||||:    
  Fly   371 FQFEFEQDMTEPLKNLGVHQMFTPNSQVTKL-MDQPVRVSKILQKAYINVGEAGTEASAAS---- 430

  Fly   336 RRKKSIDNLIQP-PMEFIADHPFFYVIHDNKVIYFQGHIVEP 376
             ..|.:...:.| |.||:|:.||.:.:.....:.|.||:..|
  Fly   431 -YAKFVPLSLPPKPTEFVANRPFVFAVRTPASVLFIGHVEYP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 113/362 (31%)
necNP_524851.1 SERPIN 108..468 CDD:238101 113/362 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446375
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
87.850

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