DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn43Aa

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:373 Identity:121/373 - (32%)
Similarity:198/373 - (53%) Gaps:27/373 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFS--ENKTLVANNYRS 79
            |..:.::.||:.....|:|.||:|.::.:.:.|..:.|:|..||:..|..|  |:|..:|.:|.:
  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHN 94

  Fly    80 LLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILN 144
            ||....:.:|  :|.:||::|..:...:...|.::|:|.|.::.:.:.......|...:|.|:..
  Fly    95 LLHSYIKSKT--VLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQ 157

  Fly   145 RTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSAS 209
            :|...|..:|  :....||:..||||||||.:|...|..:.|...:|::|.:..|.|.  |:.|.
  Fly   158 QTENKIERVV--ESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVP--TMFAD 218

  Fly   210 LLSGYID--DIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYHL-----EKKSVNVK 267
            ....|.|  ::|||.|||.:.|..|:|..||||...||:.|::|:..:|::|     :.:||:|.
  Fly   219 NWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSVSVY 283

  Fly   268 LPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLES--GAKIDKIVQKAFLKIDEKGGE---A 327
            |||||.|....|:.....:||..:|..:||.:.:..:|  |.:|.|:..|.|:.::|.|.|   |
  Fly   284 LPKFKFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGA 348

  Fly   328 SAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVE 375
            |.|.||..       :|...|..|:|||||.::|.|...:||.||||:
  Fly   349 SYAAGVPM-------SLPLDPKTFVADHPFAFIIRDKHAVYFTGHIVK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 121/373 (32%)
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 121/373 (32%)

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