DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn85F

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster


Alignment Length:238 Identity:56/238 - (23%)
Similarity:96/238 - (40%) Gaps:34/238 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LPKDFNSDTSAFLVNAIYFKGQWLYNFKADQ-THIADFYVSANEIIPVKMMTLSASLLSGYIDDI 218
            :|..|...|:.|..:.|....:...|:..|. :|:  ||:...:::.......:|.|...|.:.:
  Fly   415 VPAAFAPITNDFEPHYIGEAAEGKSNYNTDVISHV--FYLGNQQVVHTTFKVYNAVLYYKYFEHL 477

  Fly   219 DAKIIELPYWNSTLSMRIILPN------SVDGLRKLKEKVGFIDYHLEKKSVNVKLPKFKIESKA 277
            ...::||.......::.|:||:      :.....||...:..:...|:.:.|...:|.||:....
  Fly   478 KMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQLKPRWVQAIIPDFKLHGTM 542

  Fly   278 QLKGIFENLGILDVFKPS-ADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSI 341
            .|....:|:||.|||:|: ||...:..|.|..:..|.|    .||            :|.|...|
  Fly   543 FLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHIEQ----SID------------VTIRTHPI 591

  Fly   342 DNLIQ------PPMEFIADHP--FFYVIHDNKVIYFQGHIVEP 376
            :.|.:      .|::...:||  ||.|..|..|....|.|:.|
  Fly   592 NQLKRNYGAQSKPIQISVNHPFLFFIVDRDLDVAVMSGRILNP 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 55/236 (23%)
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 47/199 (24%)
Blue background indicates that the domain is not in the aligned region.

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