DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn77Bb

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:362 Identity:87/362 - (24%)
Similarity:149/362 - (41%) Gaps:66/362 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IIMSMVYMASGGKTFEELRNVLK-FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYC 106
            ::|.|.|..:.|.|..|||:||. :.:..||     |....|::   .:..|:..|....:.:|.
  Fly    12 VLMIMFYEGAEGYTVNELRDVLGIYVDYPTL-----RRWYEDVR---AYHYLNSENTKLFSLRYA 68

  Fly   107 ---------LVPEFNQLARKAF--------KAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIV 154
                     ||..:|.:..:..        :.:.:.:..|.  .||.|:|..|...:...|.:..
  Fly    69 YYDDVGDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQ--GASIIINDDIDKASHAKIFSSY 131

  Fly   155 LPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIP---VKMMTLSASLLSGYID 216
            ..:.|||..:...:...|||.:|.|.|...||.:..||.....  |   |:||..:...  .|::
  Fly   132 SRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGS--PAGKVEMMVQTGKY--AYVN 192

  Fly   217 DI---DAKIIELPYWNSTLSMRIILPNSVD------------GLRKLKEKVGFIDYHLEKKSVNV 266
            ::   .|.::|||:....|.|.::||.|..            ||.:|.||   ::....:..|.|
  Fly   193 NVKGLQADVLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEK---LEASKNETDVEV 254

  Fly   267 KLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVL---ESGAKIDKIVQKAFLKIDEKGGEAS 328
            |||||...|...|:....:.|:.|:....|||:.|::   ..||.:....|.|.:.:||:|    
  Fly   255 KLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACLTLYHQFARIVVDEEG---- 315

  Fly   329 AATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK 365
             ....:.::....:|:     :|..:.||.|::...|
  Fly   316 -LPNAVPQKSSGKNNI-----KFHVNRPFAYLVLQKK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 87/362 (24%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 87/361 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446294
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

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