DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Spn77Bb

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:362 Identity:87/362 - (24%)
Similarity:149/362 - (41%) Gaps:66/362 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IIMSMVYMASGGKTFEELRNVLK-FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYC 106
            ::|.|.|..:.|.|..|||:||. :.:..||     |....|::   .:..|:..|....:.:|.
  Fly    12 VLMIMFYEGAEGYTVNELRDVLGIYVDYPTL-----RRWYEDVR---AYHYLNSENTKLFSLRYA 68

  Fly   107 ---------LVPEFNQLARKAF--------KAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIV 154
                     ||..:|.:..:..        :.:.:.:..|.  .||.|:|..|...:...|.:..
  Fly    69 YYDDVGDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQ--GASIIINDDIDKASHAKIFSSY 131

  Fly   155 LPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIP---VKMMTLSASLLSGYID 216
            ..:.|||..:...:...|||.:|.|.|...||.:..||.....  |   |:||..:...  .|::
  Fly   132 SRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGS--PAGKVEMMVQTGKY--AYVN 192

  Fly   217 DI---DAKIIELPYWNSTLSMRIILPNSVD------------GLRKLKEKVGFIDYHLEKKSVNV 266
            ::   .|.::|||:....|.|.::||.|..            ||.:|.||   ::....:..|.|
  Fly   193 NVKGLQADVLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEK---LEASKNETDVEV 254

  Fly   267 KLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVL---ESGAKIDKIVQKAFLKIDEKGGEAS 328
            |||||...|...|:....:.|:.|:....|||:.|::   ..||.:....|.|.:.:||:|    
  Fly   255 KLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACLTLYHQFARIVVDEEG---- 315

  Fly   329 AATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK 365
             ....:.::....:|:     :|..:.||.|::...|
  Fly   316 -LPNAVPQKSSGKNNI-----KFHVNRPFAYLVLQKK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 87/362 (24%)
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 87/361 (24%)

Return to query results.
Submit another query.