DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn47C

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster


Alignment Length:373 Identity:125/373 - (33%)
Similarity:198/373 - (53%) Gaps:21/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFS-ENKTLVANNY-RS 79
            |..:.:|.|..:....|::.||..|...|::|:|.:|||:.:|||:.|... .||:.||..: .|
  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAES 82

  Fly    80 LLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILN 144
            ...:....:..:.|.:..|:|||::..:..:||.:|.:.|.|:|.|:...:|..:...||.|:..
  Fly    83 WTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNAEAYSLNYLNPEDSVKKVNKWLEK 147

  Fly   145 RTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSAS 209
            .|...:||:..|:.||||:|..|||:::|:.:|...|....|.|.||:::..:.:.|.||.....
  Fly   148 HTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQIDDFWINPRQRMEVSMMRQIGQ 212

  Fly   210 LLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYH-----LEKKSVNVKLP 269
            ...|....:.::|::||:..|.|:|.||||.::|||.:|:||:|.:|.:     ...|.|:|.:|
  Fly   213 FRYGESKKLKSQILQLPFERSNLTMMIILPTAIDGLPELEEKLGQLDMNEVAAKSLMKEVDVTIP 277

  Fly   270 KFKIESKAQLKGIFENLGILDVFKP-SADLNGLV-LESGAKIDKIVQKAFLKIDEKG----GEAS 328
            ||:||....||...:.:||..||.. .|||:.|. :::..||.:...|.||.:.|.|    .||.
  Fly   278 KFRIECTVDLKVPLQKMGINSVFDAGQADLSDLFEMKTPQKISEARHKVFLNVTEFGCEVAPEAE 342

  Fly   329 AATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVEP 376
            ....||   ||:.|...     |.||.||.:.|.|.|.:||.||.|:|
  Fly   343 VQPEVL---KKNPDRKF-----FKADRPFVFAIRDRKNVYFVGHFVKP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 124/371 (33%)
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 124/371 (33%)

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