DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Spn42De

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:380 Identity:123/380 - (32%)
Similarity:196/380 - (51%) Gaps:30/380 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKF-SENKTLVANNY 77
            |:.|....:..||...:.||:::||.|....:::.|:.:.|.|.:||:..|.. ...||.||...
  Fly    32 EAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKL 96

  Fly    78 RSLLS-----------DLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDP 131
            ..||:           |:.:      |..||||:|.:::.|...:..|..|.|.|.|:::.....
  Fly    97 DQLLAKGQWEKASGDEDVPK------LKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQK 155

  Fly   132 VSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSAN 196
            ...:..:|||:..:|...|::::.|:..::||||.||||||||..|..:|....|:.:||.....
  Fly   156 ADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGG 220

  Fly   197 EIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYH--- 258
            ..:.|..|:.......|.:.::.||::||||..:.:...||||....||..::||:..||.:   
  Fly   221 RKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEIS 285

  Fly   259 --LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLES-GAKIDKIVQKAFLKI 320
              |.::.|.|:|||||.|....|:...|.|||..:|.|.|:|:.|...| ..:|.::..||.:::
  Fly   286 SQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEV 350

  Fly   321 DEKGGEASAATGVLTRRKKSIDNLI--QPPMEFIADHPFFYVIHDNKVIYFQGHI 373
            :|||..||.||.:    |.|:::|.  :...|||||||||:.|.|.:...|.||:
  Fly   351 NEKGTTASGATFI----KVSVESLTIGEEVFEFIADHPFFFAIKDAQNTLFLGHV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 123/380 (32%)
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 123/380 (32%)

Return to query results.
Submit another query.