DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn28Da

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:379 Identity:138/379 - (36%)
Similarity:221/379 - (58%) Gaps:10/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLYLLLLATSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLK 65
            ||||..:|:.|||...|.:..||.....|.:.|:|.||:..||.|||:.|.:.|.|..|||..|.
  Fly     1 MKYLCWILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN 65

  Fly    66 FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD 130
            ..|:|..||..|..||:.|:|.:...|||:|||::||:...:...:|:|..|.|:|:|::|:|.|
  Fly    66 LPEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLAD 130

  Fly   131 PVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSA 195
            .:.|:..:|.|:|::|...:::|::|.|...|.||.::||.:|||.|...|....|....||||.
  Fly   131 RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSK 195

  Fly   196 NEIIPVKMMTLSA--SLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKV-GFIDY 257
            :..:.|.||:...  .:.:..||    :|||||:..|.|||.|:||.....|.:.:..: .:...
  Fly   196 SYQVNVNMMSQVGRFKMRTSTID----QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQI 256

  Fly   258 HLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDE 322
            .|.:..|:|:||||||:.:.:|....:::||.|:|..|:|::.|:.:||.:|.::|.|||::|||
  Fly   257 VLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDE 321

  Fly   323 KGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVEP 376
            :||.|.:|:....|   .:.:.....:.|..:.||.::|.|:..|||:|.:|:|
  Fly   322 EGGSAGSASASPIR---GLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 131/366 (36%)
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 131/366 (36%)

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