DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Spn28Db

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster


Alignment Length:385 Identity:128/385 - (33%)
Similarity:204/385 - (52%) Gaps:33/385 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLYLLLLATSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLK 65
            :|||.|||:||||...|..:... |....|:.|.|.||:..||.:||:.|.:.|.|.||||:||.
  Fly     7 IKYLVLLLIATSVLGKFKLNLLE-LVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLD 70

  Fly    66 FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD 130
            ...:.|.:|..|..::|:.::...   |...|.:|||:.|.:..::|.|.:..|.|:.|     |
  Fly    71 LPVDVTEMAKKYERIMSNFQKHNG---LRFTNWLYVNETYEVRQDYNTLMKSTFMAEGK-----D 127

  Fly   131 PVS---ASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFY 192
            |:|   ||..::..|..::...:|.|....:...:.||.|||.:|:.|.|...|....|.:..|:
  Fly   128 PLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFH 192

  Fly   193 VSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILP------NSVDG-LRKLKE 250
            ...|:.:.|:||:.....  ...|....:|||:|:.||.|||.|.||      :|::. ||.|.|
  Fly   193 GDHNKKVYVRMMSHVGRF--RIADHSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRTLSE 255

  Fly   251 KVGFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLE-SGAKIDKIVQ 314
            .       |.:.:|:|:||||||:.:.:|....:.|||..:|..::||:||:.. :||||:.:|.
  Fly   256 S-------LVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVH 313

  Fly   315 KAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIV 374
            |:|::|:|:|    |:||..:...:||....:....|..:.||.::|.|...:||:|.:|
  Fly   314 KSFIEINERG----ASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHTVYFRGRVV 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 120/374 (32%)
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 120/374 (32%)

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