DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb12

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_038946584.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:423 Species:Rattus norvegicus


Alignment Length:418 Identity:106/418 - (25%)
Similarity:196/418 - (46%) Gaps:63/418 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSE------------- 68
            |..||::.::..:|.:|:...|:|......||.:.:.|.:.:::..||.|:|             
  Rat    11 FCFDFFQEISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHFNELPKDERKEPSEPS 75

  Fly    69 ------------------------------NKTLVANNYRSLLSDLKRRETFIILHMANRIYVNK 103
                                          ...|:..::..|||.:.|.:....|.||||:|..:
  Rat    76 SKSKASDSSLEGQKQTTASQGQQVSGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYGEQ 140

  Fly   104 KYCLVPEFNQLARKAFKAKAKSIRLD-DPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFL 167
            ::.:.||::....:.:....:|:... |...:...:|.|:.::::|.|:.:...:..::.|...|
  Rat   141 EFPICPEYSDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVLVL 205

  Fly   168 VNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTL 232
            |||:|||.:|...|.::.|..|.|.:|.||...||||........|:|:::.|:|:|:.|....|
  Rat   206 VNAVYFKAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTTGKL 270

  Fly   233 SMRIILPNS----VDGLRKLKEKVGFIDY-------HLEKKSVNVKLPKFKIESKAQLKGIFENL 286
            ||.::||:|    |..|::|::|:.....       ::.:|.|.:..|:|.:|....|..:.:::
  Rat   271 SMLVLLPSSSEDNVKSLQELEKKINHEKLLAWSNPENMSEKPVAISFPQFIMEDSYDLNSVLQDM 335

  Fly   287 GILDVFK-PSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPME 350
            ||.|||. ..|||.|:.......:.|:|.|.|:::||.|.:|:||:|.:...|     .:...:|
  Rat   336 GIRDVFDGTKADLTGISKSPSLHLSKVVHKTFVEVDEMGTQAAAASGAVVAEK-----ALPSRVE 395

  Fly   351 FIADHPFFYVIHDN--KVIYFQGHIVEP 376
            |.|:.||.:.|..|  :.:.|.|.:..|
  Rat   396 FNANRPFLFFIRHNGTQSLLFCGRVYSP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 105/413 (25%)
Serpinb12XP_038946584.1 serpinB12_yukopin 1..423 CDD:381037 105/416 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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