DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb11

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_006249694.2 Gene:Serpinb11 / 304689 RGDID:1306497 Length:522 Species:Rattus norvegicus


Alignment Length:402 Identity:114/402 - (28%)
Similarity:200/402 - (49%) Gaps:54/402 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSEN-----K 70
            |:..:.|..|.::.|:|.|...|:.:||::....:||:.:.:.||:.|::..||.: :|     |
  Rat   139 TTANTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLLGARGKSAEQMEKVLHY-DNFSGFLK 202

  Fly    71 TLVANN------------YRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKA 123
            ..:.|:            :|:|:|.:.::.:   |.:|||||..|......::.:...|.::||.
  Rat   203 AKIKNSSECSQGGRMHPEFRALVSHINQQNS---LSIANRIYGTKAIEFHKQYIRCCEKLYQAKL 264

  Fly   124 KSIRLDDPVSASAI---VNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQ 185
            :::  |..:||...   :|:|:.|:|.|.|.|:......:..:...||:||||||||...|:..:
  Rat   265 QTV--DFELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTE 327

  Fly   186 THIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKE 250
            |..|.|::|..:...|.||..:.:....:|.:...:::||||.|:.|.|.|:||...       .
  Rat   328 TVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGT-------A 385

  Fly   251 KVGFIDYHLEKKS--------------VNVKLPKFKIESKAQLKGIFENLGILDVFK-PSADLNG 300
            .|..|:.||..|.              |:|.:|||.:..|..|..:.::||:.|:|. ..|||:|
  Rat   386 SVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSG 450

  Fly   301 LVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK 365
            :..:.|..:.|:|.|:::.::|:|.||:||||.....|:     :...::|.|:.||.:.|.|..
  Rat   451 MSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKR-----LPVTVQFTANCPFLFFIWDEF 510

  Fly   366 V-IYFQGHIVEP 376
            . |.|.|....|
  Rat   511 YNILFAGKFASP 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 112/391 (29%)
Serpinb11XP_006249694.2 SERPIN 138..522 CDD:294093 113/400 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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