DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Serpinb11

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_006249694.3 Gene:Serpinb11 / 304689 RGDID:1306497 Length:463 Species:Rattus norvegicus


Alignment Length:402 Identity:114/402 - (28%)
Similarity:200/402 - (49%) Gaps:54/402 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSEN-----K 70
            |:..:.|..|.::.|:|.|...|:.:||::....:||:.:.:.||:.|::..||.: :|     |
  Rat    80 TTANTEFCLDVFKELSSSNVGENIFFSPLTTFYALSMLLLGARGKSAEQMEKVLHY-DNFSGFLK 143

  Fly    71 TLVANN------------YRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKA 123
            ..:.|:            :|:|:|.:.::.:   |.:|||||..|......::.:...|.::||.
  Rat   144 AKIKNSSECSQGGRMHPEFRALVSHINQQNS---LSIANRIYGTKAIEFHKQYIRCCEKLYQAKL 205

  Fly   124 KSIRLDDPVSASAI---VNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQ 185
            :::  |..:||...   :|:|:.|:|.|.|.|:......:..:...||:||||||||...|:..:
  Rat   206 QTV--DFELSAEETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTE 268

  Fly   186 THIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKE 250
            |..|.|::|..:...|.||..:.:....:|.:...:::||||.|:.|.|.|:||...       .
  Rat   269 TVKAPFHISVGKSAVVDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGT-------A 326

  Fly   251 KVGFIDYHLEKKS--------------VNVKLPKFKIESKAQLKGIFENLGILDVFK-PSADLNG 300
            .|..|:.||..|.              |:|.:|||.:..|..|..:.::||:.|:|. ..|||:|
  Rat   327 SVNQIEKHLNAKMLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSG 391

  Fly   301 LVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK 365
            :..:.|..:.|:|.|:::.::|:|.||:||||.....|:     :...::|.|:.||.:.|.|..
  Rat   392 MSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGETISVKR-----LPVTVQFTANCPFLFFIWDEF 451

  Fly   366 V-IYFQGHIVEP 376
            . |.|.|....|
  Rat   452 YNILFAGKFASP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 112/399 (28%)
Serpinb11XP_006249694.3 None

Return to query results.
Submit another query.