DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Serpina3j

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:Serpina3j / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:388 Identity:100/388 - (25%)
Similarity:179/388 - (46%) Gaps:42/388 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTL---V 73
            |:.:.|....|:.||.:|..:|:.:||:|....::.:.:.:.|.|.:|:...|||:..:|.   :
  Rat    49 SINTDFAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEIDI 113

  Fly    74 ANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIV 138
            ..|||.||..|.:......:..||.::|.|...::..|.:.|:..::.:..:........|...:
  Rat   114 HQNYRDLLQRLSQPGGQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKFI 178

  Fly   139 NSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKM 203
            |.:::.:::|.|:.:|  .:....||..::|.:.|.|||...|..|.|.:..|.:.:...:.|.|
  Rat   179 NDYVMIQSQGKIKEMV--TELEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVKVLM 241

  Fly   204 MTLSASLLSGYIDDIDAK--IIELPYWNSTLSMRIILPN-----SVDG------LRK----LKEK 251
            |. :..|.:.|..|.:.|  ::||.|.....:| .|||:     .|:.      |||    ||.:
  Rat   242 MK-TEDLTTPYFWDEELKCTVVELNYKGHGKAM-FILPDQGKMEQVEASLHPGTLRKWTDSLKPR 304

  Fly   252 VGFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKA 316
            :  ||        .:.||||.:....:|:.|...|||:|||...|||:|:......::.:::...
  Rat   305 I--ID--------ELHLPKFSLSKTYKLENILPELGIMDVFNTQADLSGIAGAKDVRVSQMIHNT 359

  Fly   317 FLKIDEKGGEASAATGV--LTRRKKSIDNLIQPPMEFIADHPFFYVIHDN-KVIYFQGHIVEP 376
            .|.:.|.|.||.|.|.|  ..|..|..|..:....:|:     :.|:..| ::|.|...::.|
  Rat   360 VLGMAETGTEAEATTRVEYNFRPAKLNDTFVNFVRKFL-----YMVLEPNSELISFMRKVINP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 99/386 (26%)
Serpina3jXP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 99/386 (26%)

Return to query results.
Submit another query.