DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinh1

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_058869.2 Gene:Serpinh1 / 29345 RGDID:69302 Length:417 Species:Rattus norvegicus


Alignment Length:381 Identity:93/381 - (24%)
Similarity:165/381 - (43%) Gaps:36/381 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNV-----LKFSENKTLVA 74
            :|.....|:.:|...|..|::.||:.....:.:|.:.....|..:.:.|     |:..|..|.:.
  Rat    47 TGLAFSLYQAMAKDQAVENILLSPLVVASSLGLVSLGGKATTASQAKAVLSAEKLRDEEVHTGLG 111

  Fly    75 NNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVN 139
            ...|||.:...|..|:   .:.:|:|.........:|.:.:::.:..:...|...|..||...:|
  Rat   112 ELLRSLSNSTARNVTW---KLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSIN 173

  Fly   140 SWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMM 204
            .|....|.|.:..:.  ||......|.||||::||..|...|.........|.|:.:..:.|.||
  Rat   174 EWASQTTDGKLPEVT--KDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMM 236

  Fly   205 TLSASLLSGYIDDIDAK--IIELPYWNSTLSMRIILPNSVDGLRKL-----KEKVGFIDYHLEKK 262
            ..:.  |..|.||...|  ::|:|..:...|:.|::|:.|:.|.:|     ||::......::||
  Rat   237 HRTG--LYNYYDDEKEKLQLVEMPLAHKLSSLIILMPHHVEPLERLEKLLTKEQLKTWMGKMQKK 299

  Fly   263 SVNVKLPKFKIESKAQLKGIFENLGILD-VFKPSADLNGLVLESGAK---IDKIVQKAFLKIDEK 323
            :|.:.|||..:|....|:.....||:.: :.|..|||:.:   ||.|   :..:......:.|.:
  Rat   300 AVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRM---SGKKDLYLASVFHATAFEWDTE 361

  Fly   324 GGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK--VIYFQGHIVEPR 377
            |....  ..:..|.:      ::.|..|.|||||.:::.||:  .:.|.|.:|.|:
  Rat   362 GNPFD--QDIYGREE------LRSPKLFYADHPFIFLVRDNQSGSLLFIGRLVRPK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 92/378 (24%)
Serpinh1NP_058869.2 serpinH1_CBP1 35..416 CDD:381003 93/381 (24%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.

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