DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb1a

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001026812.1 Gene:Serpinb1a / 291091 RGDID:1306203 Length:379 Species:Rattus norvegicus


Alignment Length:385 Identity:126/385 - (32%)
Similarity:194/385 - (50%) Gaps:29/385 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVAN 75
            :|..|.|..:.:..|:..:...|:.:||.|....::||::.:.|.|..:|.....|...:. |.:
  Rat     5 SSANSLFALELFHTLSESSPTGNIFFSPFSISSALAMVFLGTKGTTAAQLSKTFHFDSVED-VHS 68

  Fly    76 NYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD-PVSASAIVN 139
            .::||.:::.:|.....|.:|||:|..|.|..:|||....:|.:.|....:.... ...|...:|
  Rat    69 RFQSLNAEVSKRGASHTLKLANRLYGEKTYNFLPEFLTSTQKMYGADLAPVDFQHASEDARKEIN 133

  Fly   140 SWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMM 204
            .|:..:|.|.|..::.....:|.|...|||||||||.|...|....|..|.|.::......||||
  Rat   134 QWVKGQTEGKIPELLAVGVVDSMTKLVLVNAIYFKGMWEEKFMKQDTTDAPFRLNKKNTKSVKMM 198

  Fly   205 TLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVD----GLRKLKEKVGFIDY-------H 258
            ........|||.|:..|::|:||....|||.|:||..::    ||:|::|::.....       :
  Rat   199 YQKKKFFFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQITLEKLREWTKREN 263

  Fly   259 LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPS-ADLNGLVLESGAK---IDKIVQKAFLK 319
            ||...|:||||:||||....|......||:.|:|..| |||:|:   ||::   |.|||.|||::
  Rat   264 LENIDVHVKLPRFKIEESYILNSNLGRLGLQDLFNSSKADLSGM---SGSRDLFISKIVHKAFVE 325

  Fly   320 IDEKGGEASAAT-GVLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNKV--IYFQGHIVEP 376
            ::|:|.||:||| |:.|      ..::.|..||.|||||.:.|..|..  :.|.|.:..|
  Rat   326 VNEEGTEAAAATAGIAT------FCMLLPEEEFTADHPFIFFIRHNPTANVLFLGRVCSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 123/374 (33%)
Serpinb1aNP_001026812.1 SERPIN 4..379 CDD:294093 125/383 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

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