DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb8

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001099418.1 Gene:Serpinb8 / 288937 RGDID:1309833 Length:375 Species:Rattus norvegicus


Alignment Length:365 Identity:101/365 - (27%)
Similarity:182/365 - (49%) Gaps:17/365 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLLSDLKRR 87
            :||..::..|||.:.|:|....::|||:.:.|.|..::..||..|.:.. |...:::||:::.:.
  Rat    17 KILGEEDKSRNLFFCPMSVSSALAMVYLGAKGNTATQMSQVLGLSGDGD-VHQGFQTLLAEVNKS 80

  Fly    88 ETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIR-LDDPVSASAIVNSWILNRTRGMIR 151
            .|..:|..|.|::..:....:..|.:..:|.::|..:.:. :.|.......:|.|:|.:|.|.|.
  Rat    81 GTQYLLKSACRLFGEESCDFLSTFKESCQKFYQAGIEEMSFVKDTEGCRKRINDWVLEKTEGKIS 145

  Fly   152 NIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYID 216
            .::.|......|...||||:||||:|...|....|....|..:..|...|:||...|.....::|
  Rat   146 EVLSPGTVCPLTKLVLVNAMYFKGKWKAQFDRKYTRGMPFKTNQEEKKTVQMMFKHAKFKMAHVD 210

  Fly   217 DIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYH-------LEKKSVNVKLPKFKIE 274
            :::|:::.|||....|||.::||:....|..:::.:.:....       |.:..|.|..|:.|:|
  Rat   211 EVNAQVLALPYAEDELSMVVLLPDESSDLTVVEKALTYEKLRAWTNPETLTESKVQVFFPRLKLE 275

  Fly   275 SKAQLKGIFENLGILDVFKPS-ADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRK 338
            ....|:.:.::||:.|.|:.: ||.:|:..:....:.|:..|.|::::|:|.||:|.|.|: |..
  Rat   276 ESYDLETVLQSLGMTDAFEETKADFSGMTSKKNVPVSKVAHKCFVEVNEEGTEAAATTAVI-RNT 339

  Fly   339 KSIDNLIQPPMEFIADHPFFYVIHDNKV--IYFQGHIVEP 376
            :|.  .|:|  .|.||.||.:.|...|.  |.|.|....|
  Rat   340 RSC--RIEP--RFCADRPFLFFIWHQKTSSILFCGRFSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 100/363 (28%)
Serpinb8NP_001099418.1 serpin 1..375 CDD:476815 100/363 (28%)

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