DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Serpinf2

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001011892.1 Gene:Serpinf2 / 287527 RGDID:1306692 Length:491 Species:Rattus norvegicus


Alignment Length:376 Identity:90/376 - (23%)
Similarity:162/376 - (43%) Gaps:44/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLL 81
            |..|.:.::|..:...||:.||:|..:.:|.:.:.:..:|.|.|:.||..:....:     ..||
  Rat    89 FTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGARNQTLENLQRVLHMNMGSCI-----PHLL 148

  Fly    82 SDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASA-------IVN 139
            |...:......:.:|.|||:.|.:.:..:|.:.:.|.|.||        ||..:.       .:|
  Rat   149 SHFCQNLNPGTIRLAARIYLQKGFPIKDDFLEQSEKLFGAK--------PVKLTGRQEEDLMNIN 205

  Fly   140 SWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMM 204
            .|:...|.|.|.:.:  .:...:|...|:|||:|.|.|...|....|....|::.....:||.||
  Rat   206 KWVKEATEGKIEDFL--SELPDNTVLLLLNAIHFHGFWRTKFDPSLTQKDSFHLDEQFTVPVAMM 268

  Fly   205 TLSASLLSGY-IDDIDAKIIELPYWNSTLSMRIILP-----NSVDGLRKLKEKVGFIDYHLEKKS 263
            ...:..|..: ::..:.::...|:.|: :|..:|:|     |..:.|..|.... .....:.:|.
  Rat   269 HAQSYPLRWFLLEQPEIQVAHFPFQNN-MSFVVIMPTYFGWNVSEVLANLTWDT-LYQPSMREKP 331

  Fly   264 VNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEAS 328
            ..|:|||..:|....|......||:.|:|: |.||.| :.:....:..:..::.:::.|.|.||:
  Rat   332 TKVRLPKLHLEQHLDLVATLSKLGLQDLFQ-SPDLRG-ISDQSLVVSSVQHQSTMELSEAGVEAA 394

  Fly   329 AATG-VLTRRKKSIDNLIQPPMEFIADHPFFYVIHDNK--VIYFQGHIVEP 376
            |||. .:||...|         .|..:.||.:.|.:..  :..|.|.:..|
  Rat   395 AATSTAMTRMSLS---------SFFLNRPFIFFIMEETIGIPLFVGSVRNP 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 89/374 (24%)
Serpinf2NP_001011892.1 serpinF2_A2AP 75..438 CDD:381009 90/376 (24%)

Return to query results.
Submit another query.