DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and AT2G35555

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001323897.1 Gene:AT2G35555 / 28718328 AraportID:AT2G35555 Length:122 Species:Arabidopsis thaliana


Alignment Length:112 Identity:28/112 - (25%)
Similarity:49/112 - (43%) Gaps:36/112 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LRKLKEKVGFIDYHLEKKSV--------NVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGL 301
            |.:|....||::   .|:.:        .:|:|:||.:           .|    |:.|..|.||
plant     2 LERLASTRGFLN---GKEDIPSHWADVGELKIPRFKFD-----------FG----FEASEALKGL 48

  Fly   302 VLESGAKIDKIVQKAFLKIDEKGGEASAAT-------GVLTRRKKSI 341
            .||..:   .|:.|:.:::||.|.:|:||.       |...:||.::
plant    49 GLEVPS---TIIHKSCIEVDEVGSKAAAAAVIFVGCCGPAEKRKYTL 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 28/112 (25%)
AT2G35555NP_001323897.1 serpin <1..89 CDD:476815 26/107 (24%)

Return to query results.
Submit another query.